TeletcheaLab / protGPT2
☆16Updated last year
Alternatives and similar repositories for protGPT2:
Users that are interested in protGPT2 are comparing it to the libraries listed below
- ☆25Updated 9 months ago
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆41Updated 7 months ago
- GTalign, HPC protein structure alignment, superposition and search (alpha release)☆41Updated last month
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆43Updated 2 weeks ago
- Machine learning prediction of enzyme optimum pH☆29Updated 3 weeks ago
- A domain parser for Alphafold models☆34Updated last year
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆51Updated 10 months ago
- ☆65Updated 5 months ago
- Predicts the solubility and usability for purification of proteins expressed in E. coli using protein language models☆28Updated 2 months ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆27Updated 8 months ago
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆52Updated 8 months ago
- Protein Design by Machine Learning guided Directed Evolution☆34Updated 7 months ago
- Detection of remote homology by comparison of protein language model representations☆47Updated 2 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆39Updated 3 months ago
- ☆25Updated 6 months ago
- An antibody-specific language model focusing on NGL prediction☆25Updated 6 months ago
- Inference code for Bio-Inspired Antibody Language Model☆23Updated 6 months ago
- ☆61Updated 2 months ago
- Python package to atom map, correct and suggest enzymatic reactions☆35Updated 10 months ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆45Updated 2 months ago
- ☆49Updated 8 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆81Updated 11 months ago
- RNA Multiple Sequence Alignment☆32Updated last year
- Protein language model trained on coding DNA☆46Updated 4 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆36Updated 3 months ago
- Code for humanization of antibody and nanobody☆35Updated 3 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆33Updated 3 months ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆57Updated 3 years ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆52Updated 3 months ago
- Efficient manipulation of protein structures in Python☆51Updated 3 months ago