[NeurIPS 2025] PRING: Rethinking Protein-Protein Interaction Prediciton from Pairs to Graphs
☆23Oct 1, 2025Updated 10 months ago
Alternatives and similar repositories for PRING
Users that are interested in PRING are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Official implementation for the paper "EBMDOCK: NEURAL PROBABILISTIC PROTEIN-PROTEIN DOCKING VIA A DIFFERENTIABLE ENERGY-BASED MODEL" (IC…☆14Apr 24, 2024Updated 2 years ago
- PLM-interact: extending protein language models to predict protein-protein interactions.☆72Aug 29, 2025Updated 11 months ago
- ☆16Jun 3, 2025Updated last year
- A new python package to visualize molecules in dots hover☆13Feb 15, 2024Updated 2 years ago
- A LLM-based Agent Framework for Drug Discovery☆23Jan 11, 2026Updated 7 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆33Jun 1, 2024Updated 2 years ago
- Protein-Protein Language Model with Novel Attention Mechanisms for Enhanced Inter-Protein Contact and Interaction Prediction☆65Jul 18, 2026Updated 3 weeks ago
- ☆15May 29, 2024Updated 2 years ago
- A 3D-equivariant neural network for protein structure accuracy estimation☆22Feb 24, 2023Updated 3 years ago
- PROTAC-Splitter is a machine learning framework designed for automated annotation of PROTAC substructures.☆29Jul 20, 2026Updated 3 weeks ago
- Deploying synthetic coevolution and machine learning to engineer protein-protein interactions☆17Jul 30, 2023Updated 3 years ago
- Code of "Instruction Multi-Constraint Molecular Generation Using a Teacher-Student Large Language Model"☆13Jul 8, 2025Updated last year
- No description yet.☆17Aug 8, 2024Updated 2 years ago
- a universal molecular interaction modeling platform based on AlphaFold3, supporting structure prediction and analysis for various recepto…☆49Nov 20, 2025Updated 8 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Fine-tuning DeepSeek-OCR-2 for Optical Chemical Structure Recognition, including LoRA SFT, full SFT, customized GSPO and ReFT.☆20Jul 5, 2026Updated last month
- Benchmarking scripts for Gaia☆17Apr 10, 2025Updated last year
- Deconvolving mutation effects on protein stability and function with disentangled protein language models☆18May 15, 2026Updated 3 months ago
- A convinent tool to visualize AlphaFold 3 prediction results with PyMOL and matplotlib☆19May 20, 2024Updated 2 years ago
- Environment for developing substructure-aware protein models☆16Mar 26, 2026Updated 4 months ago
- Latents-based conformational control in OpenFold3.☆76May 25, 2026Updated 2 months ago
- rspatial website using terra☆13Jun 7, 2026Updated 2 months ago
- ☆50Jan 27, 2026Updated 6 months ago
- [EMNLP 2023] ReLM: Leveraging Language Models for Enhanced Chemical Reaction Prediction.☆22Jan 28, 2024Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆12Nov 16, 2023Updated 2 years ago
- AI-powered macromolecular refinement☆48Apr 26, 2026Updated 3 months ago
- ☆25Jul 8, 2025Updated last year
- ☆85May 6, 2026Updated 3 months ago
- Semi-Supervised Regression☆12Jul 19, 2019Updated 7 years ago
- ☆24Jul 20, 2026Updated 3 weeks ago
- Rapid structure-based virtual screening for RNA targets.☆29Updated this week
- [ICLR 2025] Hotspot-Driven Peptide Design via Multi-Fragment Autoregressive Extension☆20May 5, 2025Updated last year
- Finding patch of conserved amino acid sites in 3D structure☆14Apr 13, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Files for the Genome Design/Genome Analytics Short-course organized by the SBRG☆10Nov 30, 2021Updated 4 years ago
- ☆30Apr 16, 2026Updated 3 months ago
- ☆12Mar 16, 2024Updated 2 years ago
- Code of a structure-enhanced RNA language model named ERNIE-RNA☆45May 3, 2026Updated 3 months ago
- Apo2Mol: 3D Molecule Generation via Dynamic Pocket-Aware Diffusion Models☆38Jul 20, 2026Updated 3 weeks ago
- ☆33Aug 12, 2024Updated 2 years ago
- A tool to create dependency graphs of ideas (useful for presentation or teaching)☆12Oct 31, 2024Updated last year