Alternatives and similar repositories for TBSS

Users that are interested in TBSS are comparing it to the libraries listed below

• 3Tissue / MRtrix3Tissue
  MRtrix3Tissue adds capabilities for 3-Tissue CSD modelling and analysis to a complete version of MRtrix3.
  ☆16Updated last year
• MatthieuGilson / WBLEC_toolbox
  (version 2018) Toolbox for estimation and interpretation of whole-brain linear effective connectivity
  ☆10Updated 5 years ago
• NotaCS / Functionnectome
  Project your functional brain signal onto the white matter, and explore the pathways supporting brain functions.
  ☆31Updated last year
• cmig-research-group / cmig_tools_deprecated
  Public repository of cmig_tools including FEMA
  ☆24Updated 10 months ago
• pGarciaS / PREEMACS
  PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface
  ☆17Updated last year
• thalamicseg / hipsthomasdocker
  Docker version of HIPS-THOMAS
  ☆29Updated 3 weeks ago
• DCAN-Labs / abcd-hcp-pipeline
  bids application for processing functional MRI data, robust to scanner, acquisition and age variability.
  ☆54Updated 2 months ago
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆89Updated last month
• gbarisano / alps
  Bash script to compute DTI-ALPS
  ☆62Updated last week
• LewisNeuro / HRAN
  We created a model to remove physiological noise in fast fMRI without external reference signals.
  ☆12Updated 5 years ago
• netneurolab / abagen
  A toolbox for working with Allen Human Brain Atlas microarray expression data
  ☆13Updated 8 months ago
• arash-n / GBSS
  Gray-matter Based Spatial Statistics
  ☆23Updated 2 years ago
• HumanBrainED / NHP-BrainExtraction
  ☆39Updated 3 years ago
• CoBrALab / RABIES
  fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/
  ☆45Updated last week
• neurabenn / precon_all
  precon_all surface pipline
  ☆29Updated 4 months ago
• civier / HCP-dMRI-connectome
  MRtrix scripts to generate dense weighted structural connectomes from the Human Connectome Project "minimally pre-processed" diffusion MR…
  ☆20Updated 2 years ago
• Macatools / macapype
  PNH segmentation pipelines based on nipype
  ☆24Updated last week
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆70Updated last year
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆43Updated 2 weeks ago
• neurolabusc / nii_preprocess
  nii_preprocess adapted for LARC and ABC studies at UofSC
  ☆22Updated 3 years ago
• ExploreASL / ExploreASL
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆54Updated this week
• jeffmacinnes / pyneal
  Pyneal - Real-time fMRI software
  ☆37Updated 2 years ago
• ysu001 / PUP
  PET Unified Pipeline
  ☆23Updated 4 years ago
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆71Updated this week
• PennLINC / aslprep
  Preprocessing of arterial spin labeling (ASL) data
  ☆51Updated this week
• scilus / tractoflow
  TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity
  ☆61Updated last year
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆77Updated 4 years ago
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆71Updated 10 months ago
• maartenmennes / ICA-AROMA
  ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.
  ☆101Updated last year
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆43Updated this week