LiuLab-Bioelectronics-Harvard / SpikeAgent
SpikeAgent is a multimodal LLM-based AI agent that automates and standardizes the spike sorting pipeline
☆32Updated 2 weeks ago
Alternatives and similar repositories for SpikeAgent:
Users that are interested in SpikeAgent are comparing it to the libraries listed below
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆56Updated last month
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated 6 months ago
- pynapple collaborative data analysis (high level python scripts)☆37Updated last year
- ☆51Updated 7 months ago
- Multi-probe trajectory planning in an intuitive 3D environment☆52Updated last month
- Web app for viewing results of ephys spike sorting☆25Updated 3 weeks ago
- Match suite2p ROIs between imaging sessions☆25Updated 5 years ago
- A curated list of awesome Neuropixels resources.☆95Updated last month
- WIP: Python port of Kilosort2☆50Updated last year
- pyqt5 dependent applications for IBL sessions☆26Updated 3 weeks ago
- Histology processing☆65Updated 3 weeks ago
- Tutorials for using SpikeInterface on extracellular datasets.☆63Updated last year
- Code for neural and behavioral data analysis from the Brain Computation and Behavior Lab, aka AyA Lab, at Cornell University.☆17Updated 2 weeks ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆55Updated this week
- Utilities for managing Neuropixel datasets and Kilosort results☆46Updated last year
- ☆16Updated 10 months ago
- The Freely Moving Animal (FMA) Toolbox is a Matlab toolbox. Its purpose is to help analyze electrophysiological and behavioral data recor…☆12Updated 3 years ago
- IBL core shared libraries☆62Updated last week
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆59Updated last month
- Browser-based NWB visualization and DANDI exploration☆53Updated this week
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆25Updated 3 weeks ago
- Plugins for Phy2☆16Updated 2 months ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆118Updated 2 months ago
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆21Updated last week
- Python package to handle probe layout, geometry and wiring to device.☆61Updated 3 weeks ago
- A gui for browsing joint calcium imaging + behavioral data.☆51Updated 2 months ago
- CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.☆11Updated last year
- Repository for BehaviorDEPOT pipeline app files and source code☆36Updated 5 months ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- Algorithm for automated source extraction from 1P data☆21Updated last year