Alternatives and similar repositories for CTOD

Users that are interested in CTOD are comparing it to the libraries listed below

• RyanWangZf / LEADS
  A specialized LLM for study search, study screening, and data extraction from medical literature.
  ☆12Updated 6 months ago
• RyanWangZf / BioBridge
  ICLR'24 | BioBridge: Bridging Biomedical Foundation Models via Knowledge Graphs
  ☆73Updated last year
• ncbi / MedCPT
  Code for MedCPT, a model for zero-shot biomedical information retrieval.
  ☆207Updated last year
• Paureel / LLM-SCI-GEN
  Papers about scientific hypothesis generation with large language models (LLMs).
  ☆74Updated 3 months ago
• RyanWangZf / PyTrial
  PyTrial: A Comprehensive Platform for Artificial Intelligence for Drug Development
  ☆111Updated last year
• mims-harvard / ToolUniverse
  ToolUniverse is a collection of biomedical tools designed for AI agents
  ☆213Updated 2 months ago
• wshi83 / EhrAgent
  [EMNLP'24] EHRAgent: Code Empowers Large Language Models for Complex Tabular Reasoning on Electronic Health Records
  ☆108Updated 8 months ago
• zhoujieli / Awesome-LLM-Agents-Scientific-Discovery
  A curated list of LLM powered AI Agents in Biomedical Research. Medical Image Analysis, Multi-omics Genomics Analysis, Biomedical Scienti…
  ☆53Updated 9 months ago
• som-shahlab / Clinfo.AI
  This is Clinfo.AI Demo Instruction
  ☆37Updated last year
• bioplanner / bioplanner
  Data from BioPlanner: Automatic Evaluation of LLMs on Protocol Planning in Biology paper
  ☆26Updated last year
• gosset-ai / other-public-mcps
  ☆56Updated last week
• RyanWangZf / Trial2Vec
  Findings of EMNLP'22 | Trial2Vec: Zero-Shot Clinical Trial Document Similarity Search using Self-Supervision
  ☆24Updated last year
• zzachw / llemr
  NeurIPS'24 DB (Spotlight) | Instruction Tuning Large Language Models to Understand Electronic Health Records
  ☆42Updated last week
• dmis-lab / self-biorag
  [ISMB 2024] Self-BioRAG: Improving Medical Reasoning through Retrieval and Self-Reflection with Retrieval-Augmented Large Language Models
  ☆64Updated last year
• Andy-jqa / biomedical-qa-datasets
  Biomedical Question Answering Datasets.
  ☆114Updated 4 months ago
• nyuolab / NYUTron
  public code repository for paper "Health system scale language models are general purpose clinical prediction engines"
  ☆116Updated 2 years ago
• Future-House / LAB-Bench
  Evaluation dataset for AI systems intended to benchmark capabilities foundational to scientific research in biology
  ☆83Updated 2 months ago
• MadhumitaSushil / OncLLMExtraction
  Expert-Curated Oncology Reports to Advance Language Model Inference
  ☆29Updated last year
• som-shahlab / medalign
  MedAlign is a clinician-generated dataset for instruction following with electronic medical records.
  ☆97Updated 4 months ago
• ncbi-nlp / cell-o1
  Code and data for Cell-o1.
  ☆23Updated 2 months ago
• myinsilicom / iKraph
  ☆46Updated 5 months ago
• zhao-ht / BioMaze
  ☆18Updated 6 months ago
• paulhager / MIMIC-Clinical-Decision-Making-Dataset
  Code repository to create the MIMIC-CDM Dataset.
  ☆39Updated 7 months ago
• futianfan / clinical-trial-outcome-prediction
  benchmark dataset and Deep learning method (Hierarchical Interaction Network, HINT) for clinical trial approval probability prediction, p…
  ☆130Updated 2 months ago
• Future-House / LitQA
  LitQA Eval: A difficult set of scientific questions that require context of full-text research papers to answer
  ☆41Updated 9 months ago
• phenixace / MolReGPT
  ☆51Updated last year
• ML2Health / ML2ClinicalTrials
  ☆25Updated last month
• dustn1259 / EHRCon
  Dataset for Checking Consistency between Unstructured Notes and Structured Tables in Electronic Health Records
  ☆23Updated last year
• QizhiPei / BioT5
  BioT5 (EMNLP 2023) and BioT5+ (ACL 2024 Findings)
  ☆117Updated last year
• VectorInstitute / odyssey
  A toolkit for developing foundation models using Electronic Health Record (EHR) data.
  ☆39Updated this week