Bayesian python toolbox for inference and forecast of the spread of the Coronavirus
☆72Aug 2, 2023Updated 3 years ago
Alternatives and similar repositories for covid19_inference
Users that are interested in covid19_inference are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆178Jul 3, 2023Updated 3 years ago
- R package for estimation and monitoring of the effective reproduction number in a pathogen outbreak/epidemic☆12Sep 10, 2024Updated 2 years ago
- A library implementing various linear sparse fitting techniques. Uses Tensorflow for running on GPU.☆14Dec 25, 2016Updated 9 years ago
- pycon 2023 Tutorial☆13Apr 16, 2023Updated 3 years ago
- Statistical Bootstrap in Python☆12Jun 3, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…☆13Dec 18, 2022Updated 3 years ago
- A package containing several useful R-functions for reading and plotting the results of Birth-Death Skyline (BDSKY) runs in BEAST2.☆12Nov 28, 2018Updated 7 years ago
- Bayesian Markov Chain Monte Carlo Forecast for COVID-19☆41Apr 6, 2020Updated 6 years ago
- daily SARS-CoV2 Re Values for select countries. See https://ibz-shiny.ethz.ch/covid-19-re/ for interactive visualisations.☆12Mar 23, 2023Updated 3 years ago
- Interfacing several COVID-19 related datasets☆44May 22, 2022Updated 4 years ago
- Scripts for benchmarking performance of Zarr and HDF5 in different contexts☆11Feb 21, 2019Updated 7 years ago
- A library of MATLAB functions for visualization, processing, and analysis of output from Bayesian models fit with Stan.☆10Dec 17, 2021Updated 4 years ago
- Berlin Bayesians' solutions to Bayesian Data Analysis, 3rd edition.☆21Sep 21, 2019Updated 6 years ago
- Microscopic Markov Chain Approach to model the spreading of COVID-19☆19Apr 26, 2021Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- National and subnational estimates of the time-varying reproduction number for Covid-19☆34Nov 26, 2025Updated 9 months ago
- Fork of git://git.tartarus.org/simon/putty.git intended for plink fixes☆15Nov 9, 2015Updated 10 years ago
- Python tools for Bayesian data analysis☆34May 1, 2026Updated 4 months ago
- Supplementary code for paper "Bayesian workflow for disease transmission model".☆28Feb 3, 2021Updated 5 years ago
- Live clone of https://sourceforge.net/p/docutils/code/HEAD/tree/.☆22Updated this week
- A human mobility flow-augmented stochastic SEIR-style epidemic modeling framework is developed, which combines with data assimilation and…☆15Mar 10, 2023Updated 3 years ago
- Bayesian mixed-effects modeling of fMRI data in Python☆39Oct 4, 2021Updated 4 years ago
- BFAST3D: Bayesian Fast Accurate Spatial Tricks in 3D. For fMRI analysis.☆11Sep 30, 2020Updated 5 years ago
- Code for modelling estimated deaths and cases for COVID19.☆940Mar 29, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Analyses about the COVID-19 virus☆156Aug 30, 2026Updated 3 weeks ago
- ☆18Nov 4, 2020Updated 5 years ago
- A Github action for Matlab or Octave unit tests☆14Feb 22, 2023Updated 3 years ago
- epidemia package☆50Jun 24, 2022Updated 4 years ago
- ☆13Sep 20, 2020Updated 6 years ago
- Inferring variant-specific reproduction numbers from case counts and sequencing data☆45Jul 6, 2026Updated 2 months ago
- Implementation of Inverse Autoregressive Flows with Keras☆19Mar 27, 2017Updated 9 years ago
- ☆12Jul 26, 2016Updated 10 years ago
- jmp - search files and jump to matching lines in a text editor☆13Updated this week
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Fit the algebraic growth of case numbers in Mainland China with an SIR-containment model☆22Jul 6, 2023Updated 3 years ago
- Python package to estimate the time-varying effective reproduction number of an epidemic from reported case numbers☆24Dec 12, 2020Updated 5 years ago
- Visualization in Python: an overview☆17Jul 31, 2018Updated 8 years ago
- A Tour of Time Series Analysis☆23Aug 25, 2016Updated 10 years ago
- 763例冠状病毒确诊患者的详细情况,包括出行轨迹、发病就诊时间、人传人情况。☆11Feb 6, 2020Updated 6 years ago
- Implementation of the Tower Method, a novel approach to handling missing values.☆13Mar 12, 2024Updated 2 years ago
- Set of examples with lets-plot graphs☆12Jun 10, 2021Updated 5 years ago