Course materials for OHDSI ETL tutorial
☆55Mar 18, 2026Updated 2 months ago
Alternatives and similar repositories for Tutorial-ETL
Users that are interested in Tutorial-ETL are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.☆113May 28, 2024Updated last year
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆90Apr 24, 2026Updated last month
- WhiteRabbit is a small application that can be used to analyse the structure and contents of a database as preparation for designing an E…☆214Dec 25, 2025Updated 5 months ago
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆147Dec 2, 2025Updated 5 months ago
- ARCH i2b2 PCORnet Ontology☆14May 1, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Definition and DDLs for the OMOP Common Data Model (CDM)☆1,044Nov 5, 2025Updated 6 months ago
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆92May 6, 2026Updated 2 weeks ago
- ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data☆315May 15, 2026Updated last week
- CDM Builder leveraging AWS Lambda☆21May 18, 2026Updated last week
- A Docker container that includes the OHDSI WebAPI (running in Apache Tomcat) and the OHDSI web applications.☆10Nov 2, 2022Updated 3 years ago
- ☆29Jul 15, 2023Updated 2 years ago
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆73Aug 28, 2025Updated 8 months ago
- An R package that facilitates access to a variety of OMOP CDM sample data sets.☆48May 22, 2025Updated last year
- COVID-19 / SARS-CoV-2 FHIR Profiles Implementation Guide (IG)☆17Aug 9, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆42Nov 10, 2023Updated 2 years ago
- A collection of Helm charts☆10May 16, 2026Updated last week
- ETL-CDMBuilder is a repo containing a .NET Core application to perform ETL to OMOP CDM for multiple databases☆55Jan 28, 2026Updated 3 months ago
- Model Context Protocol Server for the Observational Medical Outcomes Partnership (OMOP) Common Data Model☆27Jan 12, 2026Updated 4 months ago
- OMOP <-> FHIR mapper☆11Mar 6, 2023Updated 3 years ago
- ETL code for converting Korean National Sample Cohort (NSC) derived from national insurance health service into OMOP-CDM v5 developed by …☆10Nov 20, 2019Updated 6 years ago
- R Package to support quality control inspection of an OMOP-CDM instance☆13Feb 13, 2025Updated last year
- ☆12May 30, 2025Updated 11 months ago
- ETL Tool for converting datasets to OMOP CDM☆37Nov 24, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A web-based platform that allows the building and management of ETL pipelines in a multi-institution environment.☆17Apr 13, 2022Updated 4 years ago
- ☆25Feb 3, 2025Updated last year
- A tool to help improve data quality standards in observational data science.☆176May 18, 2026Updated last week
- Shiny apps in this repository will be automatically deployed to the OHDSI Shiny server.☆27Feb 18, 2025Updated last year
- The PEDSnet Data Quality Assessment Toolkit (OMOP CDM)☆27Apr 16, 2021Updated 5 years ago
- Mapping the MIMIC-III database to the OMOP schema☆146Mar 17, 2024Updated 2 years ago
- Scripts to extract features of cortical folding from MRI☆12Mar 10, 2025Updated last year
- An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.☆89May 11, 2026Updated 2 weeks ago
- Outcomes Insights' Data Model for Clinical Research☆20May 6, 2026Updated 2 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- The website for the Research Software Alliance☆13Updated this week
- Dashboards showing intrinsic meta data for the OMOP-CDM databases in the EHDEN data network☆14Feb 12, 2026Updated 3 months ago
- Implements REST and Java APIs to access OpenMRS via FHIR Specification.☆43Jul 2, 2021Updated 4 years ago
- Automation code and documentation for standing up the OHDSI toolstack in an AWS environment☆77May 16, 2023Updated 3 years ago
- Phe2vec: Automated Disease Phenotyping based on Unsupervised Embeddings from Electronic Health Records☆24Nov 20, 2020Updated 5 years ago
- Use R to generate a database containing the UK Biobank data schemas from http://biobank.ctsu.ox.ac.uk/crystal/schema.cgi☆21Feb 26, 2021Updated 5 years ago
- Virtual Machine containing SynPUF data in OMOP CDM, a RDBS including query client, WebAPI, ATLAS, R and Python.☆58Mar 7, 2021Updated 5 years ago