OHDSI / WhiteRabbitLinks
WhiteRabbit is a small application that can be used to analyse the structure and contents of a database as preparation for designing an ETL. It comes with RabbitInAHat, an application for interactive design of an ETL to the OMOP Common Data Model with the help of the the scan report generated by White Rabbit.
☆192Updated last month
Alternatives and similar repositories for WhiteRabbit
Users that are interested in WhiteRabbit are comparing it to the libraries listed below
Sorting:
- A tool to help improve data quality standards in observational data science.☆161Updated 5 months ago
- A package supporting the conversion from Synthea CSV to OMOP CDM☆110Updated 3 months ago
- ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data☆283Updated last month
- ETL-CDMBuilder is a repo containing a .NET Core application to perform ETL to OMOP CDM for multiple databases☆53Updated last week
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆139Updated 2 weeks ago
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆81Updated last month
- Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.☆96Updated last year
- Course materials for OHDSI ETL tutorial☆48Updated 7 months ago
- Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.☆242Updated last week
- OHDSI WebAPI contains all OHDSI services that can be called from OHDSI applications☆138Updated 2 weeks ago
- The Book of OHDSI repository☆118Updated 8 months ago
- Oncology Working Group Repository☆56Updated last week
- Workproducts to ETL CMS datasets into OMOP Common Data Model☆100Updated 3 years ago
- An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.☆196Updated 2 weeks ago
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated 6 months ago
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆61Updated 2 months ago
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆36Updated last year
- Virtual Machine containing SynPUF data in OMOP CDM, a RDBS including query client, WebAPI, ATLAS, R and Python.☆55Updated 4 years ago
- Automation code and documentation for standing up the OHDSI toolstack in an AWS environment☆75Updated 2 years ago
- R on FHIR☆54Updated 4 years ago
- Definition and DDLs for the OMOP Common Data Model (CDM)☆960Updated 2 months ago
- Tools that make it easier to use FHIR® and clinical terminology within data analytics, built on Apache Spark.☆99Updated this week
- Mapping the MIMIC-III database to the OMOP schema☆135Updated last year
- Main OMOPonFHIR Settings☆45Updated 3 years ago
- An R package for performing various cohort diagnostics.☆45Updated last week
- Training materials for Vocabulary & CDM Tutorial.☆21Updated 5 years ago
- HEDIS FHIR-based Quality Reporting☆29Updated 5 years ago
- ☆25Updated 4 months ago
- SQL on FHIR Proposal☆79Updated last year
- Leaf Clinical Data Explorer☆91Updated 2 months ago