OHDSI / WhiteRabbitLinks
WhiteRabbit is a small application that can be used to analyse the structure and contents of a database as preparation for designing an ETL. It comes with RabbitInAHat, an application for interactive design of an ETL to the OMOP Common Data Model with the help of the the scan report generated by White Rabbit.
☆202Updated 3 weeks ago
Alternatives and similar repositories for WhiteRabbit
Users that are interested in WhiteRabbit are comparing it to the libraries listed below
Sorting:
- A tool to help improve data quality standards in observational data science.☆166Updated 3 weeks ago
- ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data☆296Updated last week
- A package supporting the conversion from Synthea CSV to OMOP CDM☆118Updated 8 months ago
- Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.☆102Updated last year
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆142Updated this week
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆71Updated 2 months ago
- OHDSI WebAPI contains all OHDSI services that can be called from OHDSI applications☆140Updated last week
- Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.☆251Updated last week
- Course materials for OHDSI ETL tutorial☆52Updated 3 weeks ago
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆83Updated 6 months ago
- The Book of OHDSI repository☆124Updated last year
- Workproducts to ETL CMS datasets into OMOP Common Data Model☆100Updated 3 years ago
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated 2 months ago
- Oncology Working Group Repository☆57Updated last month
- Main OMOPonFHIR Settings☆45Updated 3 years ago
- Leaf Clinical Data Explorer☆97Updated 6 months ago
- Tools that make it easier to use FHIR and clinical terminology within data analytics, built on Apache Spark.☆113Updated last week
- ETL-CDMBuilder is a repo containing a .NET Core application to perform ETL to OMOP CDM for multiple databases☆53Updated this week
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆38Updated last year
- An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.☆210Updated this week
- Virtual Machine containing SynPUF data in OMOP CDM, a RDBS including query client, WebAPI, ATLAS, R and Python.☆57Updated 4 years ago
- Explore, transform, and analyze FHIR data with Apache Spark☆116Updated last year
- ☆25Updated 8 months ago
- A Node.js framework for extracting mCODE FHIR resources☆22Updated last year
- ☆29Updated 7 years ago
- Mapping the MIMIC-III database to the OMOP schema☆143Updated last year
- [Under development] A dbt ETL project to convert a Synthea synthetic data set into the OMOP CDM☆32Updated last week
- R on FHIR☆53Updated 4 years ago
- Definition and DDLs for the OMOP Common Data Model (CDM)☆984Updated 2 months ago
- Clinical Quality Language (CQL) is an HL7 specification for the expression of clinical knowledge that can be used within both the Clinica…☆294Updated this week