OHDSI / dbt-syntheaLinks
[Under development] A dbt ETL project to convert a Synthea synthetic data set into the OMOP CDM
☆29Updated 2 weeks ago
Alternatives and similar repositories for dbt-synthea
Users that are interested in dbt-synthea are comparing it to the libraries listed below
Sorting:
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆37Updated last year
- A tool to help improve data quality standards in observational data science.☆164Updated 6 months ago
- A package supporting the conversion from Synthea CSV to OMOP CDM☆113Updated 4 months ago
- ☆25Updated 5 months ago
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆82Updated 3 months ago
- Workproducts to ETL CMS datasets into OMOP Common Data Model☆100Updated 3 years ago
- Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.☆98Updated last year
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆63Updated 4 months ago
- An R package that facilitates access to a variety of OMOP CDM sample data sets.☆45Updated last month
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated 8 months ago
- Course materials for OHDSI ETL tutorial☆48Updated 8 months ago
- ☆29Updated 2 years ago
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆140Updated 2 weeks ago
- ☆12Updated last month
- ETL Tool for converting datasets to OMOP CDM☆33Updated 2 years ago
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆80Updated 2 weeks ago
- The Book of OHDSI repository☆120Updated 10 months ago
- Data Ingestion and Harmonization☆45Updated 2 months ago
- An R package for performing various cohort diagnostics.☆46Updated last month
- Virtual Machine containing SynPUF data in OMOP CDM, a RDBS including query client, WebAPI, ATLAS, R and Python.☆55Updated 4 years ago
- FHIR-PYrate is a package that provides a high-level API to query FHIR Servers for bundles of resources and return the structured informat…☆68Updated last week
- Streamlined Data Mapping to OMOP☆19Updated this week
- WhiteRabbit is a small application that can be used to analyse the structure and contents of a database as preparation for designing an E…☆193Updated 3 months ago
- Tools that make it easier to use FHIR® and clinical terminology within data analytics, built on Apache Spark.☆105Updated this week
- OHDSI WebAPI contains all OHDSI services that can be called from OHDSI applications☆138Updated this week
- Conversion from FHIR HL7 to OMOP CDM☆17Updated 5 months ago
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆24Updated 4 years ago
- PCORnet Ontology to OMOP - beta!☆11Updated last year
- [Under development] Assessment of Pre-trained Observational Large Language-models in OHDSI (APOLLO)☆14Updated last year
- Main OMOPonFHIR Settings☆46Updated 3 years ago