OHDSI / dbt-synthea
[Under development] A dbt ETL project to convert a Synthea synthetic data set into the OMOP CDM
☆20Updated this week
Alternatives and similar repositories for dbt-synthea:
Users that are interested in dbt-synthea are comparing it to the libraries listed below
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆33Updated last year
- ☆25Updated 9 months ago
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆76Updated 9 months ago
- An R package that facilitates access to a variety of OMOP CDM sample data sets.☆43Updated 4 months ago
- A tool to help improve data quality standards in observational data science.☆150Updated last month
- ☆12Updated 4 months ago
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated 2 months ago
- Training materials for Vocabulary & CDM Tutorial.☆21Updated 5 years ago
- Clinical Research Informatics☆13Updated last year
- A package supporting the conversion from Synthea CSV to OMOP CDM☆100Updated last month
- ☆28Updated last year
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆60Updated 3 months ago
- An R package for performing various cohort diagnostics.☆42Updated 2 weeks ago
- ☆26Updated 6 years ago
- Data Ingestion and Harmonization☆43Updated last year
- Course materials for OHDSI ETL tutorial☆45Updated 3 months ago
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆23Updated 3 years ago
- ETL-CDMBuilder is a repo containing a .NET Core application to perform ETL to OMOP CDM for multiple databases☆50Updated last year
- Provides backbone infrastructure elements for OHNLP toolsets.☆14Updated last month
- ☆14Updated 3 weeks ago
- Workproducts to ETL CMS datasets into OMOP Common Data Model☆98Updated 2 years ago
- ETL Tool for converting datasets to OMOP CDM☆29Updated 2 years ago
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆75Updated 2 weeks ago
- An R package for generating features (covariates) for a cohort using data in the Common Data Model.☆61Updated 3 months ago
- A repository to store, organize and maintain the content of the OHDSI Phenotype library. OHDSI Forum post https://forums.ohdsi.org/t/ohds…☆42Updated 3 months ago
- This repository is for developing study packages for OHDSI studies. Once completed, they can be moved to the StudyProtocols repository.☆32Updated 3 years ago
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries!☆39Updated this week
- [Under development] Assessment of Pre-trained Observational Large Language-models in OHDSI (APOLLO)☆14Updated 7 months ago
- CDM Builder leveraging AWS Lambda☆15Updated this week
- ☆10Updated 4 years ago