Tornado server for tracking samples at NGI Stockholm
☆12Oct 7, 2026Updated last week
Alternatives and similar repositories for genomics-status
Users that are interested in genomics-status are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Concordance between variant callers☆17Nov 27, 2014Updated 11 years ago
- Python interface to the GenoLogics LIMS server via its REST API.☆30Aug 13, 2025Updated last year
- DEPRECATED Lightweight bioinformatics pipeline tools using iPython☆14Dec 11, 2015Updated 10 years ago
- Creates a rarefaction curve to measure complexity in RNA Seq data using start position☆13Apr 2, 2017Updated 9 years ago
- A tool to examine duplicate read characteristics in a BAM file☆12Dec 8, 2017Updated 8 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Shimmer is a software package for the characterization of genetic differences between two very similar samples, e.g., a tumor sample and …☆12Jan 12, 2023Updated 3 years ago
- A software suite for Probe Design and Proximity Detection for targeted chromosome conformation capture applications☆13Oct 5, 2026Updated 2 weeks ago
- Bacterial typing pipeline for clinical NGS data. Written in NextFlow, Python & Bash.☆16Updated this week
- A nextflow pipeline with a GMS touch for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbio…☆10Jan 23, 2026Updated 8 months ago
- fast bloomfilter☆21May 13, 2014Updated 12 years ago
- An attempt to make HLA typing from OxfordNanopore reads (MinION platform)☆13Aug 20, 2018Updated 8 years ago
- A needle plot for mutation data☆27Aug 31, 2017Updated 9 years ago
- This pipeline has moved! Please see:☆11Mar 12, 2018Updated 8 years ago
- Simple interface to BioMart (Python -> rpy2 -> R/BioConductor's biomaRt)☆15May 21, 2014Updated 12 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Fast Structural Variation Detection Toolbox☆19Feb 16, 2015Updated 11 years ago
- ☆17Sep 24, 2013Updated 13 years ago
- Homebrew repository for CloudBioLinux: incubator for formulas to end up in homebrew-science☆19Oct 17, 2016Updated 10 years ago
- MedSavant is a search engine for genetic variants☆22Apr 21, 2016Updated 10 years ago
- hyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data☆14Jul 12, 2024Updated 2 years ago
- Tool for the Automation of Cleanup and Analyses: tools for projects and data management at NGI Stockholm☆14Sep 23, 2026Updated 3 weeks ago
- Genomics database manager☆25Mar 3, 2014Updated 12 years ago
- Blacktie: a streamlined interface to the popular tophat/cufflinks RNA-seq pipeline☆26Oct 5, 2015Updated 11 years ago
- The original version of MGA has been archived - please see https://github.com/crukci-bioinformatics/mga2 instead.☆24Apr 15, 2021Updated 5 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Bioinformatics with Unix, bash, Make, Python, and parallel☆22Aug 17, 2020Updated 6 years ago
- Workshop material for BioC Asia 2019☆13Dec 22, 2021Updated 4 years ago
- SARS-CoV-2 analysis pipeline for multiplex-PCR MPS(Massive Parrallel Sequencing) data☆20Jan 24, 2022Updated 4 years ago
- Python pipeline for neuroimaging data☆14Sep 15, 2025Updated last year
- eXtasy: Variant Prioritization by Genomic Data Fusion☆13Feb 19, 2014Updated 12 years ago
- Experimental projects made with xygine☆11Mar 17, 2024Updated 2 years ago
- Android Toasts -- Simple user feedback about background operations☆14Oct 7, 2013Updated 13 years ago
- A configurable de novo assembly pipeline☆30Jun 29, 2016Updated 10 years ago
- 10x Genomics Linked-Read Diploid De Novo Assembler☆68Sep 1, 2026Updated last month
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Ion Torrent SDK Docs☆10Dec 26, 2022Updated 3 years ago
- Visualize next generation sequencing reads over putative structural variants☆13Aug 25, 2014Updated 12 years ago
- Infrastructure code to support DNA pipeline☆38May 5, 2015Updated 11 years ago
- Analyze exome data for Mendelian disorders. Still in alpha-testing.☆10Apr 13, 2016Updated 10 years ago
- In-silico PCR amplification on complete genomes☆11Sep 10, 2026Updated last month
- Report generator for Chanjo output☆10Jun 5, 2024Updated 2 years ago
- IPython Integration into Galaxy☆31Jan 22, 2019Updated 7 years ago