☆18Apr 21, 2026Updated 6 months ago
Alternatives and similar repositories for genomics-analysis
Users that are interested in genomics-analysis are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆47Apr 27, 2026Updated 6 months ago
- ☆145Oct 14, 2026Updated 2 weeks ago
- Clinical Variant Annotation Pipeline☆10Apr 21, 2020Updated 6 years ago
- NVIDIA BioNeMo☆79Jun 22, 2026Updated 4 months ago
- cz-benchmarks is a package for standardized evaluation and comparison of machine learning models for biological applications.☆59Dec 19, 2025Updated 10 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Geo Bio MCP - A Model Context Protocol (MCP) server for accessing GEO (Gene Expression Omnibus) data through NCBI E-Utils API☆18Apr 20, 2026Updated 6 months ago
- HUB for Bio Image Analysis☆13Updated this week
- add true-negative SVs from a population callset to a truth-set.☆14Jun 17, 2022Updated 4 years ago
- Browser for ExAC consortium data☆11Oct 23, 2017Updated 9 years ago
- Fairness in single-cell data☆21Mar 25, 2026Updated 7 months ago
- The Loss-of-Function ToolKit (LoFTK) allows efficient and automated prediction of LoF variants from both genotyped and sequenced genomes,…☆10Jul 30, 2025Updated last year
- Library for indexing VCF files for random access searches by rsID☆17Mar 2, 2026Updated 7 months ago
- ☆26Oct 12, 2026Updated 2 weeks ago
- LLVM's loop analysis theory (Scalar Evolution) formalized in Coq☆10Nov 17, 2018Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Prove formulas of Presburger Arithmetic☆12Oct 5, 2024Updated 2 years ago
- A family of codon-resolution language models trained on 130 million protein-coding sequences from over 20,000 species.☆101Oct 19, 2026Updated last week
- A Boolean Algebra for Genetic Variants☆14Updated this week
- Oncogenicity Variant Interpreter for somatic variants☆16Sep 8, 2026Updated last month
- TOPMed analysis pipeline☆52Oct 10, 2023Updated 3 years ago
- Exome Copy Number Variation Polisher via Deep Learning☆18Jun 1, 2020Updated 6 years ago
- A developed pipeline for Transposable element analysis.☆11Sep 30, 2025Updated last year
- A python tool for parsing pedigree files☆16Aug 29, 2017Updated 9 years ago
- Analysis framework for morphological profiling data☆14Updated this week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Generation of disentangled microenvironment-induced and intrinsic gene expression vectors from spatial transcriptomics data☆28Jul 3, 2026Updated 3 months ago
- Variant Graph Craft (VGC) is an interactive genomic variant visualization program.☆19May 17, 2024Updated 2 years ago
- An esoteric programming language with just two data types: null and tape☆11Jan 31, 2024Updated 2 years ago
- ☆13Feb 19, 2017Updated 9 years ago
- ☆13May 7, 2026Updated 5 months ago
- CULiNGAM accelerates LiNGAM analysis on GPUs.☆10Mar 8, 2024Updated 2 years ago
- Source code for the learning pi through force blog☆12Jul 13, 2026Updated 3 months ago
- Blazingly fast, streaming duplicate detection for NGS data☆22Oct 22, 2026Updated last week
- This is the repository for the variant impact predictor VarIpred.☆12May 2, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Scatterd is a Python package for easy and fast creation of beautiful scatter plots.☆13Feb 21, 2026Updated 8 months ago
- Spatial Tumor Microenvironment (SpatialTME) database is a comprehensive database designed for characterize tumor spatial microenvironment…☆13Dec 4, 2023Updated 2 years ago
- d3heatmap is a Python package to create interactive heatmaps based on d3js.☆11Oct 19, 2026Updated last week
- Deep Learning Processing Library for Biological Data☆13Updated this week
- ClinVar Mapping and Annotation Toolkit☆20Sep 23, 2026Updated last month
- Software implementing stratified LD fourth moments regression.☆11May 10, 2019Updated 7 years ago
- Curvature-based Feature Selection method☆13Mar 12, 2022Updated 4 years ago