Moado / Community_DetectionLinks
A curated list of community detection research papers with implementations.
☆13Updated 6 years ago
Alternatives and similar repositories for Community_Detection
Users that are interested in Community_Detection are comparing it to the libraries listed below
Sorting:
- [AAAI'22] RepBin: Constraint-Based Graph Representation Learning for Metagenomic Binning☆25Updated 2 years ago
- complex Chaos Game Representation for DNA sequences☆21Updated 10 months ago
- your friendly pangenome graph genotyper☆10Updated 3 years ago
- Fast and exact ILP-based solvers for the Minimum Flow Decomposition problem, and variants of it.☆14Updated 2 months ago
- AlfaPang builds pangenome graphs without alignments or references.☆15Updated 2 months ago
- ☆10Updated 3 years ago
- ☆14Updated 6 years ago
- ☆19Updated 11 months ago
- ☆15Updated 2 years ago
- Higher-order genetic interaction discovery with network-based biological priors.☆13Updated last year
- A plant organellar Graphical Fragment Assembly toolkit☆16Updated 4 months ago
- An accurate aligner of long reads to a variation graph, based on co-linear chaining☆34Updated 8 months ago
- Rust package for constructing and analyzing phylogenies. (unpolished & unmaintained)☆15Updated 9 months ago
- Catalogue of pairwise alignment algorithms and benchmarks☆25Updated last month
- A "Navie" Implementation of the Wavefront Algorithm For Sequence Alignment with Gap-Affine Scoring☆14Updated 2 years ago
- ☆14Updated last week
- A tool for sniffing out the differences in vari-Ants☆38Updated last week
- R integration for edlib, a C/C++ library for pairwise sequence alignment using edit distance (Levenshtein distance).☆11Updated 6 months ago
- A novel biclustering algorithm for analyses of transcriptomic data.☆18Updated 6 years ago
- ☆25Updated 4 years ago
- Tool to flag foldback and chimeric artifacts in long-read sequence alignment files☆18Updated 2 weeks ago
- Long-read aligner to pangenome graphs☆29Updated last year
- A flexible and fast sgRNA counter from FASTQ Files☆10Updated last month
- Population genetics analysis on VG☆16Updated 4 years ago
- Sequence Distance Graph framework: graph + reads + mapping + analysis☆25Updated 3 years ago
- Singular Genomics Demultiplexing Tool☆16Updated last year
- Optimal distance lower bound k-mer sampling.☆12Updated last year
- A rust wrapper for the spoa C++ partial order alignment library☆10Updated 7 months ago
- Pipeline for analyzing rare mutations in metagenome-assembled genomes☆10Updated 10 months ago
- Minimum plain text representation of kmer sets☆16Updated last year