Alternatives and similar repositories for Community_Detection

Users that are interested in Community_Detection are comparing it to the libraries listed below

• xuehansheng / RepBin
  [AAAI'22] RepBin: Constraint-Based Graph Representation Learning for Metagenomic Binning
  ☆24Updated last year
• AlgoLab / complexCGR
  complex Chaos Game Representation for DNA sequences
  ☆21Updated 9 months ago
• Kingsford-Group / miniception
  ☆14Updated 5 years ago
• noamteyssier / sgcount
  A flexible and fast sgRNA counter from FASTQ Files
  ☆10Updated 3 weeks ago
• OSU-BMBL / QUBIC2
  A novel biclustering algorithm for analyses of transcriptomic data.
  ☆18Updated 6 years ago
• evanbiederstedt / edlibR
  R integration for edlib, a C/C++ library for pairwise sequence alignment using edit distance (Levenshtein distance).
  ☆11Updated 6 months ago
• pangenome / gfagino
  your friendly pangenome graph genotyper
  ☆10Updated 2 years ago
• AdamCicherski / AlfaPang
  AlfaPang builds pangenome graphs without alignments or references.
  ☆14Updated 2 months ago
• krishnanlab / GenePlexus
  Data, results, and code accompanying the manuscript: "Supervised learning is an accurate method for network-based gene classification"
  ☆10Updated 4 years ago
• xuehansheng / DeepMNE-CNN
  [Briefings in Bioinformatics'20] Integrating multi-network topology for gene function prediction using deep neural networks
  ☆14Updated 6 years ago
• fedarko / strainFlye
  Pipeline for analyzing rare mutations in metagenome-assembled genomes
  ☆10Updated 9 months ago
• algbio / matchtigs
  Minimum plain text representation of kmer sets
  ☆16Updated 11 months ago
• Daniel-Liu-c0deb0t / dlb-kmer-sampling
  Optimal distance lower bound k-mer sampling.
  ☆12Updated last year
• lrobidou / KFC
  ☆19Updated 11 months ago
• refresh-bio / clusty
  ☆14Updated 7 months ago
• COMBINE-lab / pufferfish2
  ☆15Updated 2 years ago
• ArcInstitute / mmr
  A minimap2 implementation with binseq inputs
  ☆17Updated last month
• lvrcek / GNNome-assembly
  Learning to untangle genome assembly with graph neural networks.
  ☆72Updated last year
• seangibbons / percentile_normalization
  Percentile-normalization method for correcting batch effects in case-control studies
  ☆12Updated 6 years ago
• algbio / GraphChainer
  An accurate aligner of long reads to a variation graph, based on co-linear chaining
  ☆34Updated 7 months ago
• klovens / juxtapose
  ☆10Updated 3 years ago
• nlhepler / spoa-rs
  A rust wrapper for the spoa C++ partial order alignment library
  ☆10Updated 7 months ago
• lukaslueg / hyperminhash
  ☆18Updated 3 weeks ago
• ban-m / jtk
  JTK -- a regional diploid genome assembler
  ☆25Updated last year
• Singular-Genomics / singular-demux
  Singular Genomics Demultiplexing Tool
  ☆16Updated last year
• PacificBiosciences / portello
  Transfer HiFi read mappings from their own assembly contigs to a standard reference
  ☆28Updated 3 weeks ago
• unipept / umgap
  A taxonomic classifier for shotgun metagenomics reads
  ☆11Updated 9 months ago
• dnbaker / minicore
  Fast and memory-efficient clustering + coreset construction, including fast distance kernels for Bregman and f-divergences.
  ☆34Updated 2 years ago
• COMBINE-lab / piscem-infer
  ☆14Updated 5 months ago
• GPZ-Bioinfo / tmap
  topological data analysis of population-scale microbiomes
  ☆31Updated 2 years ago