Alternatives and similar repositories for Community_Detection

Users that are interested in Community_Detection are comparing it to the libraries listed below

• xuehansheng / RepBin
  [AAAI'22] RepBin: Constraint-Based Graph Representation Learning for Metagenomic Binning
  ☆25Updated 2 years ago
• AlgoLab / complexCGR
  complex Chaos Game Representation for DNA sequences
  ☆21Updated 10 months ago
• Kingsford-Group / miniception
  ☆14Updated 6 years ago
• unipept / umgap
  A taxonomic classifier for shotgun metagenomics reads
  ☆11Updated 10 months ago
• pangenome / gfagino
  your friendly pangenome graph genotyper
  ☆10Updated 3 years ago
• AdamCicherski / AlfaPang
  AlfaPang builds pangenome graphs without alignments or references.
  ☆15Updated 3 months ago
• algbio / matchtigs
  Minimum plain text representation of kmer sets
  ☆16Updated last year
• lrobidou / KFC
  ☆19Updated 11 months ago
• cschin / wavefront-aln
  A "Navie" Implementation of the Wavefront Algorithm For Sequence Alignment with Gap-Affine Scoring
  ☆14Updated 2 years ago
• algbio / GraphChainer
  An accurate aligner of long reads to a variation graph, based on co-linear chaining
  ☆34Updated 8 months ago
• refresh-bio / clusty
  ☆14Updated last week
• tolkit / gfatk
  A plant organellar Graphical Fragment Assembly toolkit
  ☆16Updated 4 months ago
• c5shen / EMMA
  an ensemble usage of MAFFT-linsi --add on large datasets
  ☆13Updated last year
• jheinz27 / breakinator
  Tool to flag foldback and chimeric artifacts in long-read sequence alignment files
  ☆18Updated 2 weeks ago
• klovens / juxtapose
  ☆10Updated 3 years ago
• jorgemf / DeepLatentMicrobiome
  ☆19Updated 5 years ago
• aljpetri / isONclust3
  De novo clustering of long transcript reads into genes
  ☆18Updated last month
• COMBINE-lab / pufferfish2
  ☆15Updated 2 years ago
• Daniel-Liu-c0deb0t / dlb-kmer-sampling
  Optimal distance lower bound k-mer sampling.
  ☆12Updated last year
• GPZ-Bioinfo / tmap
  topological data analysis of population-scale microbiomes
  ☆32Updated 3 years ago
• anthbapt / multixrank
  ☆20Updated last year
• pangenome / genotypify
  Genotyping lots of samples with big pangenomes
  ☆11Updated 3 months ago
• noamteyssier / sgcount
  A flexible and fast sgRNA counter from FASTQ Files
  ☆10Updated last month
• gcgreenberg / LexicHash
  A novel method for sequence similarity estimation
  ☆28Updated last year
• St4NNi / jam-rs
  Just another minhash implementation.
  ☆12Updated last week
• bo1929 / krepp
  A k-mer-based maximum likelihood method for estimating distances of reads to genomes and phylogenetic placement.
  ☆18Updated last month
• mbhall88 / skc
  Shared k-mer content between two genomes
  ☆18Updated 2 years ago
• lukaslueg / hyperminhash
  ☆18Updated last month
• thecgs / quickprot
  QuickProt: A Fast and Accurate Homology-Based Protein Annotation Tool for Non-Model Organisms to Advance Comparative Genomics
  ☆16Updated 3 weeks ago
• jdidion / pairwise-alignment
  Catalogue of pairwise alignment algorithms and benchmarks
  ☆25Updated last month