Alternatives and similar repositories for MIND

Users that are interested in MIND are comparing it to the libraries listed below

• flatironinstitute / nemos
  NEural MOdelS, a statistical modeling framework for neuroscience.
  ☆102Updated last week
• LorenFrankLab / spyglass
  Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF
  ☆102Updated last week
• slinderman / ml4nd
  Machine Learning Methods for Neural Data Analysis
  ☆19Updated 3 months ago
• RichieHakim / ROICaT
  Region Of Interest Classification and Tracking
  ☆24Updated last week
• HelmchenLabSoftware / Cascade
  Calibrated inference of spiking from calcium ΔF/F data using deep networks
  ☆151Updated 2 weeks ago
• AllenInstitute / openscope_databook
  OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁…
  ☆71Updated last month
• zivlab / island
  Revealing neural correlates of behavior without behavioral measurements
  ☆15Updated 5 years ago
• MouseLand / rastermap
  a visualization method for neural data
  ☆235Updated 4 months ago
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆95Updated last year
• m-beau / NeuroPyxels
  NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…
  ☆128Updated last month
• int-brain-lab / ibllib
  IBL core shared libraries
  ☆63Updated this week
• MouseLand / pykilosort
  WIP: Python port of Kilosort2
  ☆50Updated 2 years ago
• PeyracheLab / pynacollada
  pynapple collaborative data analysis (high level python scripts)
  ☆37Updated last year
• joao-semedo / communication-subspace
  Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)
  ☆47Updated 5 years ago
• neuroethology / bentoMAT
  A gui for browsing joint calcium imaging + behavioral data.
  ☆53Updated 7 months ago
• nelpy / nelpy
  Neuroelectrophysiology object model and data analysis in Python.
  ☆50Updated 3 weeks ago
• nsteinme / steinmetz-et-al-2019
  Code accompanying Steinmetz et al., 2019
  ☆60Updated 4 years ago
• arthur-pe / slicetca
  Library to perform Slice Tensor Component Analysis (sliceTCA)
  ☆54Updated 5 months ago
• int-brain-lab / mtscomp
  Multichannel time series lossless compression in pure Python based on NumPy and zlib
  ☆40Updated 5 months ago
• ahwillia / tensortools
  A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA
  ☆36Updated last year
• flatironinstitute / neurosift
  Browser-based NWB visualization and DANDI exploration
  ☆59Updated this week
• catalystneuro / neuroconv
  Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
  ☆62Updated this week
• schultzlab / Neural_Manifolds
  A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and di…
  ☆27Updated last year
• gloewing / photometry_FLMM
  Code for Functional Mixed Models for Fiber Photometry
  ☆13Updated last month
• paninski-lab / yass
  YASS: Yet Another Spike Sorter
  ☆70Updated 2 years ago
• cunningham-lab / neurocaas
  IaC codebase for the NeuroCAAS Platform
  ☆38Updated last year
• MouseLand / facemap
  Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…
  ☆174Updated last month
• flatironinstitute / dendro-old
  Analyze neuroscience data in the cloud
  ☆18Updated 11 months ago
• int-brain-lab / ONE
  Open Neurophysiology Environment
  ☆20Updated 2 months ago
• Eden-Kramer-Lab / replay_trajectory_classification
  State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data
  ☆49Updated 11 months ago