JoramKeijser / MINDLinks
Implemenation of Manifold Inference from Neural Dynamics (MIND) from Low & Lewallen et. al, '18
☆30Updated 6 years ago
Alternatives and similar repositories for MIND
Users that are interested in MIND are comparing it to the libraries listed below
Sorting:
- NEural MOdelS, a statistical modeling framework for neuroscience.☆111Updated last week
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆106Updated this week
- WIP: Python port of Kilosort2☆50Updated 2 years ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆138Updated 5 months ago
- IBL core shared libraries☆65Updated this week
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆41Updated 8 months ago
- Library to perform Slice Tensor Component Analysis (sliceTCA)☆58Updated 9 months ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆157Updated 3 weeks ago
- a visualization method for neural data☆239Updated 8 months ago
- ☆60Updated 3 years ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆71Updated this week
- Revealing neural correlates of behavior without behavioral measurements☆15Updated 6 years ago
- OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁…☆73Updated 4 months ago
- State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data☆52Updated 2 months ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆46Updated 6 years ago
- Machine Learning Methods for Neural Data Analysis☆20Updated 6 months ago
- Mesoscale activity ephys ingest schema☆11Updated 2 years ago
- A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and di…☆30Updated 2 years ago
- Code accompanying Steinmetz et al., 2019☆60Updated 4 years ago
- IaC codebase for the NeuroCAAS Platform☆39Updated last year
- miniscope analysis pipeline with interactive visualizations☆96Updated last year
- YASS: Yet Another Spike Sorter☆70Updated 3 years ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆122Updated last year
- Browser-based NWB visualization and DANDI exploration☆62Updated 2 weeks ago
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- Region Of Interest Classification and Tracking☆27Updated this week
- ☆23Updated last year
- pynapple collaborative data analysis (high level python scripts)☆38Updated this week
- Code to train and analyze multi-region data-constrained RNNs and perform Current-Based Decomposition (CURBD)☆55Updated 4 years ago
- Open Neurophysiology Environment☆21Updated 3 weeks ago