JoramKeijser / MINDLinks
Implemenation of Manifold Inference from Neural Dynamics (MIND) from Low & Lewallen et. al, '18
☆30Updated 6 years ago
Alternatives and similar repositories for MIND
Users that are interested in MIND are comparing it to the libraries listed below
Sorting:
- IBL core shared libraries☆63Updated 2 weeks ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆147Updated last month
- NEural MOdelS, a statistical modeling framework for neuroscience.☆100Updated this week
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆101Updated this week
- A gui for browsing joint calcium imaging + behavioral data.☆52Updated 5 months ago
- a visualization method for neural data☆229Updated 3 months ago
- ☆55Updated 2 years ago
- miniscope analysis pipeline with interactive visualizations☆94Updated 11 months ago
- OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁…☆69Updated this week
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆126Updated 2 weeks ago
- Library to perform Slice Tensor Component Analysis (sliceTCA)☆53Updated 4 months ago
- Revealing neural correlates of behavior without behavioral measurements☆14Updated 5 years ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆169Updated 3 months ago
- Code to train and analyze multi-region data-constrained RNNs and perform Current-Based Decomposition (CURBD)☆53Updated 4 years ago
- WIP: Python port of Kilosort2☆51Updated 2 years ago
- Code accompanying Steinmetz et al., 2019☆60Updated 3 years ago
- ☆52Updated 10 months ago
- State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data☆49Updated 9 months ago
- "Approaches to Study Neural Circuits" course☆65Updated 7 months ago
- pynapple collaborative data analysis (high level python scripts)☆37Updated last year
- IaC codebase for the NeuroCAAS Platform☆38Updated last year
- Machine Learning Methods for Neural Data Analysis☆18Updated 2 months ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆61Updated this week
- Open Neurophysiology Environment☆19Updated 3 weeks ago
- Region Of Interest Classification and Tracking☆19Updated this week
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆58Updated 2 years ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆46Updated 5 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆61Updated last year
- ☆23Updated 5 years ago
- Browser-based NWB visualization and DANDI exploration☆59Updated 2 weeks ago