JoramKeijser / MINDLinks
Implemenation of Manifold Inference from Neural Dynamics (MIND) from Low & Lewallen et. al, '18
☆30Updated 6 years ago
Alternatives and similar repositories for MIND
Users that are interested in MIND are comparing it to the libraries listed below
Sorting:
- NEural MOdelS, a statistical modeling framework for neuroscience.☆101Updated this week
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆102Updated this week
- IBL core shared libraries☆63Updated this week
- Machine Learning Methods for Neural Data Analysis☆19Updated 2 months ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆150Updated this week
- Library to perform Slice Tensor Component Analysis (sliceTCA)☆53Updated 5 months ago
- OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁…☆71Updated 3 weeks ago
- IaC codebase for the NeuroCAAS Platform☆38Updated last year
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆127Updated last month
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆40Updated 4 months ago
- Revealing neural correlates of behavior without behavioral measurements☆15Updated 5 years ago
- WIP: Python port of Kilosort2☆50Updated 2 years ago
- Code accompanying Steinmetz et al., 2019☆60Updated 3 years ago
- a visualization method for neural data☆235Updated 4 months ago
- Neuroelectrophysiology object model and data analysis in Python.☆50Updated last week
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆173Updated 2 weeks ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆47Updated 5 years ago
- Open Neurophysiology Environment☆20Updated last month
- A gui for browsing joint calcium imaging + behavioral data.☆52Updated 6 months ago
- Pytorch implementation of LocaNMF☆36Updated 5 years ago
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆62Updated this week
- Browser-based NWB visualization and DANDI exploration☆60Updated this week
- Visualization of electrophysiological data from Elephant☆24Updated 9 months ago
- A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and di…☆27Updated last year
- pynapple collaborative data analysis (high level python scripts)☆37Updated last year
- ☆55Updated 2 years ago
- ☆22Updated 9 months ago
- A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA☆35Updated last year
- Mesoscale activity ephys ingest schema☆11Updated 2 years ago