JoramKeijser / MINDLinks
Implemenation of Manifold Inference from Neural Dynamics (MIND) from Low & Lewallen et. al, '18
☆30Updated 6 years ago
Alternatives and similar repositories for MIND
Users that are interested in MIND are comparing it to the libraries listed below
Sorting:
- NEural MOdelS, a statistical modeling framework for neuroscience.☆103Updated last week
- IBL core shared libraries☆63Updated this week
- a visualization method for neural data☆236Updated 5 months ago
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆40Updated 6 months ago
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆103Updated last week
- OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁…☆71Updated 2 months ago
- Library to perform Slice Tensor Component Analysis (sliceTCA)☆54Updated 6 months ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆151Updated 3 weeks ago
- WIP: Python port of Kilosort2☆50Updated 2 years ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆131Updated 2 months ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆47Updated 5 years ago
- Open Neurophysiology Environment☆21Updated this week
- Code accompanying Steinmetz et al., 2019☆60Updated 4 years ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆63Updated last week
- Machine Learning Methods for Neural Data Analysis☆19Updated 4 months ago
- Revealing neural correlates of behavior without behavioral measurements☆15Updated 5 years ago
- ☆58Updated 3 years ago
- Matlab interface for Latent Factor Analysis via Dynamical Systems (LFADS)☆50Updated 3 years ago
- Region Of Interest Classification and Tracking☆25Updated last week
- State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data☆49Updated this week
- Code for Functional Mixed Models for Fiber Photometry☆13Updated last month
- Neuroelectrophysiology object model and data analysis in Python.☆50Updated last month
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated last year
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- Browser-based NWB visualization and DANDI exploration☆59Updated last week
- A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and di…☆28Updated last year
- IaC codebase for the NeuroCAAS Platform☆38Updated last year
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆175Updated last month
- pynapple collaborative data analysis (high level python scripts)☆37Updated last year
- "Approaches to Study Neural Circuits" course☆66Updated 9 months ago