Alternatives and similar repositories for DNAPerceiver

Users that are interested in DNAPerceiver are comparing it to the libraries listed below

• cgoliver / rnaglib
  Toolkit for structure-based deep learning on RNA.
  ☆40Updated last month
• mahdip72 / prot2token
  This is the official repository of Prot2Token paper.
  ☆38Updated 4 months ago
• Bunnybeibei / GexMolGen
  Cross-modal generation of molecules from gene expression inputs. (Briefings in Bioinformatics 2024)
  ☆11Updated 5 months ago
• wukevin / proteinclip
  Contrastive learning harmonizing protein language models and natural language models
  ☆38Updated last year
• Sanofi-Public / CodonBERT
  Repository for mRNA Paper and CodonBERT publication.
  ☆133Updated last year
• alchemab / antiberta
  Public repository describing training and testing of AntiBERTa.
  ☆61Updated 2 years ago
• KailiWang1 / RLBind
  a deep learning architecture for RNA-ligand binding sites prediction
  ☆18Updated last year
• mnielLab / AbEpiTope-1.0
  AbEpiTope-1.0 is a computational tool that features two scores: AbEpiScore-1.0, designed for assessing the accuracy of modelled AbAg inte…
  ☆23Updated 3 weeks ago
• UniBind / UniBind
  ☆37Updated 2 years ago
• Exscientia / abodybuilder3
  ☆69Updated last year
• ml4bio / RiboDiffusion
  ISMB-24/Bioinformatics: Tertiary Structure-based RNA Inverse Folding with Generative Diffusion Models
  ☆52Updated 11 months ago
• gozsari / ProtFeat
  ProtFeat is protein feature extraction tool that utilizes POSSUM and iFeature.
  ☆20Updated last year
• IBM / ReprogBERT
  Code for ICML 2023 paper "Reprogramming Pretrained Language Models for Antibody Sequence Infilling"
  ☆24Updated last month
• alchemab / parapred-pytorch
  PyTorch implementation of Parapred (Liberis et al., 2018) with Paratyping (Richardson et al., 2021)
  ☆20Updated 2 years ago
• Graylab / IgLM
  Generative Language Modeling for Antibody Design
  ☆170Updated last year
• microsoft / protein-transfer
  ☆26Updated last year
• programmablebio / ptm-mamba
  ☆80Updated 5 months ago
• aqlaboratory / rgn2
  ☆107Updated last year
• JueWangTHU / CLAPE-SMB
  Contrastive learning and pre-trained encoder (CLAPE) for protein-small molecules binding (SMB) sites prediction
  ☆17Updated last year
• AbSciBio / unlocking-de-novo-antibody-design
  ☆127Updated last year
• BioinfoMachineLearning / DIPS-Plus
  The Enhanced Database of Interacting Protein Structures for Interface Prediction
  ☆50Updated 2 months ago
• dhesin / RNABERT-2
  ☆13Updated 2 years ago
• AspirinCode / awesome-BioMolGenFold
  RNA, mRNA, DNA, Peptide, Protein, Antibody and Complex | Folding
  ☆37Updated 3 months ago
• naity / finetune-esm
  Scalable Protein Language Model Finetuning with Distributed Learning and Advanced Training Techniques such as LoRA.
  ☆29Updated last year
• brennanaba / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆57Updated 11 months ago
• NasimAbdollahi / NodeCoder
  NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.
  ☆33Updated last year
• HUBioDataLab / DrugGEN
  Official implementation of DrugGEN: Target Specific De Novo Design of Drug Candidate Molecules with Graph Transformer-based Generative Ad…
  ☆84Updated last month
• kirjner / GGS
  This repository implements Gibbs sampling with Graph-based Smoothing
  ☆39Updated last year
• bowang-lab / AGILE
  AGILE Platform: A Deep Learning-Powered Approach to Accelerate LNP Development for mRNA Delivery
  ☆45Updated 5 months ago
• IBM / fold2seq
  Code for Fold2Seq paper from ICML 2021
  ☆50Updated 3 years ago