Alternatives and similar repositories for spm-notebooks

Users that are interested in spm-notebooks are comparing it to the libraries listed below

• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆63Updated last week
• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆73Updated 11 months ago
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆42Updated 3 weeks ago
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆66Updated last week
• PennLINC / qsirecon
  Reconstruction of preprocessed q-space images (dMRI)
  ☆11Updated this week
• ExploreASL / ExploreASL
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆53Updated last week
• PennLINC / aslprep
  Preprocessing of arterial spin labeling (ASL) data
  ☆50Updated 2 weeks ago
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆158Updated 2 months ago
• benoitberanger / niix2bids
  Automatic BIDS architecture
  ☆14Updated 10 months ago
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆86Updated last month
• openneuropet / PET2BIDS
  PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sh…
  ☆29Updated this week
• CoBrALab / RABIES
  fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/
  ☆43Updated 2 weeks ago
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆42Updated 8 months ago
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆78Updated 4 years ago
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆71Updated 7 months ago
• ChristianGaser / cat12
  Computational Anatomy Toolbox for SPM12 or SPM25
  ☆36Updated this week
• ottaviadipasquale / react-fmri
  REACT: Receptor-Enriched Analysis of functional Connectivity by Targets
  ☆20Updated last year
• inm7 / jubrain-anatomy-toolbox
  JuBrain Anatomy Toolbox
  ☆20Updated 6 years ago
• gllmflndn / gifti
  MATLAB/Octave GIfTI Library
  ☆27Updated 4 months ago
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆67Updated last year
• PennLINC / xcp_d
  Post-processing of fMRIPrep, NiBabies, and HCP outputs
  ☆98Updated 2 weeks ago
• atdemarco / svrlsmgui
  A graphical multivariate lesion-symptom mapping toolbox
  ☆11Updated last year
• khanlab / hippunfold
  BIDS App for Hippunfold (automated hippocampal unfolding and subfield segmentation)
  ☆59Updated this week
• ecr05 / MSM_HOCR
  Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries
  ☆41Updated 2 years ago
• kwagstyl / surface_tools
  Tools for mesh surface-based operations
  ☆36Updated 4 months ago
• HALFpipe / HALFpipe
  ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
  ☆98Updated last week
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆70Updated this week
• MASILab / SynBOLD-DisCo
  Synthetic BOLD images for distortion correction of fMRI without additional calibration scans
  ☆26Updated last year
• pGarciaS / PREEMACS
  PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface
  ☆17Updated last year
• openneuropet / PET_pipelines
  A suite of brain PET processing pipelines
  ☆14Updated 6 months ago