LizzyParkerPannell / Untargeted_metabolomics_workflowLinks
Collaborative workflow for untargeted metabolomics data processing and analysis using open-source tools. https://doi.org/10.3390/metabo13040463
☆8Updated 2 years ago
Alternatives and similar repositories for Untargeted_metabolomics_workflow
Users that are interested in Untargeted_metabolomics_workflow are comparing it to the libraries listed below
Sorting:
- High level functionality to support and simplify metabolomics data annotation.☆16Updated last week
- R Interface to the Metabolights REST API☆11Updated last month
- This is a repo for migration of CROssBAR data to the Neo4j database via BioCypher☆9Updated last month
- metabCombiner R Package: Paired Untargeted Metabolomics Feature Matching & Data Concatenation☆11Updated last year
- data processing for MS-based metabolomics☆15Updated 6 months ago
- Repository for MetaboShiny, a novel R and RShiny based metabolomics data analysis package.☆17Updated last month
- Paired Mass Distance(PMD) analysis for GC/LC-MS based nontarget analysis☆10Updated last month
- Core utilities for metabolomics.☆9Updated 3 weeks ago
- Rocker image for metabolomics data analysis☆13Updated last week
- Interactive software to analyze and browse mass spectrometry data☆21Updated last year
- Metabolomics experimental design, sample metadata configuration, and sample data acquisition.☆10Updated 6 years ago
- Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016☆12Updated 5 years ago
- QC systems for metabolomics studies☆10Updated 3 weeks ago
- Introduction to bioinformatics and data science☆9Updated 2 months ago
- MyChem.info: A BioThings API for chemical/drug annotations☆16Updated last month
- Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets☆12Updated 3 years ago
- FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…☆13Updated 3 years ago
- Creating and using (chemical) compound databases☆18Updated last week
- FELLA: an R package for Metabolomics data enrichment through diffusion☆22Updated 4 years ago
- R/Bioconductor package - STRUCT (STatistics in R Using Class Templates) Toolbox☆10Updated 2 weeks ago
- cimcb is a package containing the necessary tools for the statistical analysis of untargeted and targeted metabolomics data.☆10Updated 2 years ago
- Single sample pathway analysis tools for omics data☆12Updated 6 months ago
- R codes for creating metamapp graphs and files☆8Updated 2 years ago
- Toolkit for untargeted metabolomics profiling☆12Updated last year
- ☆21Updated last year
- Variational autoencoders learn universal latent representations of metabolomics data (supplementary code)☆13Updated 2 years ago
- On-instrument and post-acquisition targeted feature extraction☆12Updated last year
- PathIntegrate Python package for pathway-based multi-omics data integration☆16Updated 6 months ago
- A MALDI Mass Spectrometry Bioinformatics Platform☆30Updated 5 months ago
- Converting LC−MS-based Untargeted Metabolomics Data into Image towards Clinical Diagnosis☆12Updated 2 years ago