LizzyParkerPannell / Untargeted_metabolomics_workflow
Collaborative workflow for untargeted metabolomics data processing and analysis using open-source tools. https://doi.org/10.3390/metabo13040463
☆8Updated last year
Alternatives and similar repositories for Untargeted_metabolomics_workflow:
Users that are interested in Untargeted_metabolomics_workflow are comparing it to the libraries listed below
- R Interface to the Metabolights REST API☆10Updated 11 months ago
- High level functionality to support and simplify metabolomics data annotation.☆15Updated 2 months ago
- data processing for MS-based metabolomics☆15Updated 3 months ago
- Rocker image for metabolomics data analysis☆13Updated 3 weeks ago
- A Bio2BEL package for DrugBank (https://www.drugbank.ca)☆9Updated 4 years ago
- Paired Mass Distance(PMD) analysis for GC/LC-MS based nontarget analysis☆10Updated last month
- PathIntegrate Python package for pathway-based multi-omics data integration☆12Updated 3 months ago
- R/Bioconductor package - STRUCT (STatistics in R Using Class Templates) Toolbox☆10Updated this week
- Repository for MetaboShiny, a novel R and RShiny based metabolomics data analysis package.☆17Updated 5 months ago
- FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…☆13Updated 3 years ago
- Interactive software to analyze and browse mass spectrometry data☆21Updated last year
- Tutorials on machine learning, artificial intelligence in general and in biomedical research.☆12Updated 9 months ago
- Python-based framework for computational immunomics☆13Updated last year
- Core utilities for metabolomics.☆9Updated 4 months ago
- This repository contains scripts related to Surendran P, Stewart I et al. Nature Medicine 2022 "Rare and common genetic causes of chemica…☆17Updated 2 years ago
- Notes for "Introduction to Systems Programming" - 234124 (Technion)☆14Updated 2 years ago
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.☆32Updated 7 months ago
- MyChem.info: A BioThings API for chemical/drug annotations☆16Updated last month
- A Deep Learning Framework to Interpret Raw Mass Spectrometry (m/z) Data☆19Updated last year
- Python toolbox for multi-omics data mapping and analysis☆23Updated last year
- ☆11Updated 8 months ago
- Single sample pathway analysis tools for omics data☆12Updated 3 months ago
- Analysis platform for large-scale dose-dependent data☆23Updated last week
- A collection of awesome lipidomics tools and resources☆12Updated 2 years ago
- ☆15Updated last year
- Analyses for "State of the field in multi-omics research: from computational needs to data mining and sharing"☆26Updated last year
- A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis☆11Updated this week
- A MALDI Mass Spectrometry Bioinformatics Platform☆30Updated 2 months ago
- On-instrument and post-acquisition targeted feature extraction☆12Updated 8 months ago