Jfortin1 / neuroCombatLinks
Harmonization of multi-site imaging data with ComBat (Python)
☆140Updated 2 years ago
Alternatives and similar repositories for neuroCombat
Users that are interested in neuroCombat are comparing it to the libraries listed below
Sorting:
- Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variabl…☆103Updated this week
- Pretrained neural networks for UK Biobank brain MRI images. SFCN, 3D-ResNet etc.☆153Updated 9 months ago
- Subtype and Stage Inference (SuStaIn) algorithm with an example using simulated data.☆163Updated 5 months ago
- Harmonization of multi-site imaging data with ComBat☆294Updated last year
- Convolutional Neural Network trained for age prediction using a large (n=11,729) set of MRI scans from a highly diversified cohort spanni…☆52Updated 4 years ago
- Neuro Imaging Chart of AI-based Imaging Biomarkers☆21Updated this week
- ☆33Updated 10 months ago
- Framework for the reproducible classification of Alzheimer's disease using machine learning☆41Updated 3 years ago
- DeepPrep: An accelerated, scalable, and robust pipeline for neuroimaging preprocessing empowered by deep learning☆87Updated last week
- Preprocessing of diffusion MRI☆155Updated last month
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆63Updated 7 months ago
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆141Updated 2 weeks ago
- RadTract: enhanced tractometry with radiomics-based imaging biomarkers for improved predictive modelling.☆11Updated 11 months ago
- Multi-site dMRI harmonization☆48Updated last month
- MNI152 Template☆42Updated 5 years ago
- LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation☆35Updated 3 months ago
- DTI-ALPS: diffusion tensor imaging along the perivascular space☆12Updated 9 months ago
- ☆37Updated last week
- Normative modelling using deep autoencoders: a multi-cohort study on mild cognitive impairment and Alzheimer’s disease☆27Updated 2 years ago
- Implementation of Combat harmonization method with scikit-learn compatible format☆24Updated 5 years ago
- White matter tractography clustering and more...☆76Updated last week
- 3D residual neural network that predicts age based on brain MRI images (implemented using TensorFlow 2).☆64Updated 3 years ago
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆73Updated 11 months ago
- Correcting Covariance Batch Effects (CovBat): Harmonization of mean and covariance for multi-site data☆24Updated 2 years ago
- Harmonization of brain imaging features using bayesian inference☆18Updated last year
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆77Updated 4 years ago
- Official code for "Brain age prediction: A comparison between machine learning models using region- and voxel-based morphometric data" pa…☆21Updated 3 years ago
- A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!☆92Updated 3 months ago
- Software for generating a brain-predicted age value, using Gaussian Processes regression, implemented in R☆89Updated last year
- The open source toolbox for reproducible diffusion MRI-based microstructure estimation☆107Updated 6 months ago