andy1764 / CovBat_HarmonizationLinks
Correcting Covariance Batch Effects (CovBat): Harmonization of mean and covariance for multi-site data
☆27Updated 2 years ago
Alternatives and similar repositories for CovBat_Harmonization
Users that are interested in CovBat_Harmonization are comparing it to the libraries listed below
Sorting:
- Implementation of Combat harmonization method with scikit-learn compatible format☆23Updated 6 years ago
- Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variabl…☆116Updated last week
- ☆40Updated 7 months ago
- This repository contains a Python implementation of Morphometric INverse Divergence (MIND) calculation for the estimation of structural s…☆49Updated last year
- Code used for Hippocampus Anterior/Posterior gene expression and neuroimaging analyses☆11Updated 2 years ago
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆78Updated 4 years ago
- A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!☆101Updated 11 months ago
- A package, and script, to perform imaging transcriptomics on a neuroimaging scan.☆28Updated last year
- Code supporting the recent preprint Markello et al., 2020☆36Updated last year
- Subtype and Stage Inference [Young+, Nature Communications 2018]☆14Updated 4 years ago
- PET Unified Pipeline☆24Updated 5 years ago
- This repository will host scripts used to map structural and functional brain connectivity matrices for the UK biobank dataset.☆71Updated 2 months ago
- Code for paper Heritability and interindividual variability of regional structure-function coupling.☆23Updated 3 years ago
- Code used in the lifespan brainchart project☆89Updated 11 months ago
- A toolbox for working with Allen Human Brain Atlas microarray expression data☆112Updated last year
- R package to implement longitudinal ComBat: A method for harmonizing multi-batch longitudinal data☆38Updated 5 months ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆73Updated this week
- Subtype and Stage Inference (SuStaIn) algorithm with an example using simulated data.☆194Updated 3 months ago
- A statistics and context decoding toolbox for neuroimaging.☆116Updated 2 weeks ago
- Code for predicting individual differences in behavioral variables (e.g., intelligence, personality) from resting-state fMRI functional c…☆40Updated 2 years ago
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆73Updated 2 weeks ago
- Project your functional brain signal onto the white matter, and explore the pathways supporting brain functions.☆35Updated last year
- Data and code supporting Hansen et al., 2023 PLOS Biology "Integrating multimodal and multiscale connectivity blueprints of the human cer…☆35Updated 6 months ago
- BIDS app wrapping recon-all from FreeSurfer☆44Updated last month
- ☆17Updated last year
- ☆19Updated 2 years ago
- ComBat Family of Harmonization Methods☆29Updated 2 weeks ago
- Software for generating a brain-predicted age value, using Gaussian Processes regression, implemented in R☆103Updated 2 years ago
- Code for processing and analysis of resting state fMRI☆50Updated 5 years ago
- Data and code supporting Hansen et al., 2022, Nature Communications, "Local molecular and global connectomic contributions to cross-disor…☆25Updated 3 years ago