Python-based client for downloading data made available through portals powered by the GDC-based portal system..
☆23Jun 10, 2026Updated 4 months ago
Alternatives and similar repositories for portal_client
Users that are interested in portal_client are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A genome binning method for contig binning, based on semi-supervised spectral clustering method.☆12Nov 21, 2020Updated 5 years ago
- Get ALL of the AKER Kit source file packs. If you love them, don't forget to tell us about it - aaron@akerkits.com☆10May 24, 2017Updated 9 years ago
- File naming consistency verification tool.☆18Jul 15, 2020Updated 6 years ago
- The OSDF JSON-Schema files for the HMP project☆14Aug 26, 2021Updated 5 years ago
- COCACOLA: a general framework for binning contigs in metagenomic studies incorporating read COverage, CorrelAtion, sequence COmposition a…☆17Mar 12, 2017Updated 9 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- My rstudio::conf 2018 presentation slides☆10Jan 16, 2023Updated 3 years ago
- Napari training material for a workshop by the CZI funded initiatives LIBRE hub, Napari, and several amazing volunteers☆10Sep 28, 2023Updated 3 years ago
- Core utilities for single-cell RNA-seq☆13Jun 16, 2026Updated 3 months ago
- An alignment and analysis pipeline for Ribosome Profiling and RNA-seq data☆13Jul 2, 2024Updated 2 years ago
- New Harvest in-incubator perfusion system for cellular agriculture and biomedical engineering☆15Oct 23, 2024Updated last year
- API for the IGS data portal☆11May 6, 2021Updated 5 years ago
- Analysis tool for Nanopore sequencing data☆11Apr 26, 2024Updated 2 years ago
- Pipeline for analyzing rare mutations in metagenome-assembled genomes☆10Apr 4, 2025Updated last year
- Master repository that documents how the different parts come together of the open source hardware Fluorescence Activated (Microfluidic) …☆15Dec 8, 2025Updated 10 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Automatically exported from code.google.com/p/ebi-metagenomics☆11Jun 25, 2018Updated 8 years ago
- Analyzes whole genome sequencing data for gene-editing verification☆13Aug 31, 2026Updated last month
- Capacitively Coupled Contactless Conductivity Detector (C4D) for Capillary Electrophoresis☆17Jan 26, 2023Updated 3 years ago
- Opal is a toolkit for that enables rapid deployment of scientific applications as Web services☆12Jul 11, 2022Updated 4 years ago
- [retired] CouchDB database and document setup tool☆20Oct 14, 2016Updated 9 years ago
- How to build a simple alignment laser for typical optical alignment tasks.☆18Apr 16, 2026Updated 5 months ago
- Code related to Swanson, et. al. for TEA-seq, ICICLE-seq, and scATAC-seq data processing, analysis, and visualization☆13Sep 20, 2021Updated 5 years ago
- FASTAptamer: A Bioinformatic Toolkit for High-Throughput Sequence Analysis of Combinatorial Selections☆11Oct 7, 2024Updated 2 years ago
- colored table output in R terminal☆17Sep 27, 2022Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Recipes for open microscopy☆13Dec 7, 2020Updated 5 years ago
- Flask app for gene over-representation analysis based on Wikidata.☆21Nov 26, 2024Updated last year
- Automatically source dotenv files into your Nextflow scope☆10Mar 27, 2026Updated 6 months ago
- a place for GA4GH-related wiki pages☆17Aug 3, 2017Updated 9 years ago
- Take your Shiny skills to the next level☆22Aug 19, 2024Updated 2 years ago
- A tool for computing the coding potential of RNA transcript sequences using deep learning classification model☆58Oct 11, 2022Updated 3 years ago
- Nextflow plugin implementation skeleton☆11Sep 1, 2025Updated last year
- Engaging visualisations, made easy.☆14Aug 7, 2024Updated 2 years ago
- Read HOMER motif analysis output in R.☆18Mar 1, 2018Updated 8 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows☆17Mar 7, 2022Updated 4 years ago
- Pipeline for Ribosome Profiling Data☆19Sep 3, 2026Updated last month
- For computational analysis of bacterial RNA-seq data☆12Jul 14, 2017Updated 9 years ago
- Parts list and build instructions for our high-numerical-aperture lightsheet. Read the publication here: https://andrewgyork.github.io/hi…☆22Jun 21, 2024Updated 2 years ago
- A collection of tools and software provided for free for those contributing to alleviating the COVID-19 pandemic☆22Apr 7, 2021Updated 5 years ago
- The Pathway Interaction Database (PID) is software supporting the access and display of information about bio-molecular interactions and …☆15Jun 18, 2026Updated 3 months ago
- A selection of short scripts for analyzing microbial genomes☆14Jun 26, 2018Updated 8 years ago