Python-based client for downloading data made available through portals powered by the GDC-based portal system..
☆21Mar 4, 2026Updated last month
Alternatives and similar repositories for portal_client
Users that are interested in portal_client are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Data analysis pipeline for scNT-seq (single-cell metabolically labeled new RNA tagging sequencing)☆16Jun 30, 2023Updated 2 years ago
- Genearlized mapping scripts for RNA-seq and Patch-seq data☆18Sep 29, 2025Updated 6 months ago
- Simple example of autonomous research ran in parallel from my Aetherius Ai Assistant project. Uses Openai's GPT-3.5, GPT-4, and Microsof…☆15May 11, 2023Updated 2 years ago
- An implementation of the prediction strength algorithm from Tibshirani, Walther, Botstein, and Brown's "Cluster validation by prediction …☆18Feb 17, 2011Updated 15 years ago
- ☆19Aug 20, 2018Updated 7 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- MGnify documentation and Jupyter Lab notebooks to support downstream analysis of MGnify data (EMBL-EBI's metagenomics platform)☆15Mar 6, 2026Updated last month
- programmable access to GM repo☆29May 16, 2023Updated 2 years ago
- My rstudio::conf 2018 presentation slides☆10Jan 16, 2023Updated 3 years ago
- 🧭 Resolve, visualize and browse the content of any SPARQL endpoint☆14May 6, 2023Updated 2 years ago
- Core utilities for single-cell RNA-seq☆13Apr 6, 2026Updated last week
- Open source platform for the complete machine learning lifecycle☆15Aug 25, 2018Updated 7 years ago
- Lightweight C++ library for reading FASTA and FASTQ files.☆11Feb 16, 2019Updated 7 years ago
- Scripts related to VISp and ALM scRNA-seq and FISH analysis for Tasic, et al., 2018.☆24Jun 15, 2018Updated 7 years ago
- Pipeline for analyzing rare mutations in metagenome-assembled genomes☆10Apr 4, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Automatically exported from code.google.com/p/ebi-metagenomics☆11Jun 25, 2018Updated 7 years ago
- Hierarchical, iterative clustering for analysis of transcriptomics data in R☆120Aug 20, 2025Updated 7 months ago
- Opal is a toolkit for that enables rapid deployment of scientific applications as Web services☆12Jul 11, 2022Updated 3 years ago
- AWS IAM Client Package☆14May 11, 2020Updated 5 years ago
- Parse samtools pileup file to get how many bases and what kind of bases are called☆14Apr 30, 2024Updated last year
- FASTAptamer: A Bioinformatic Toolkit for High-Throughput Sequence Analysis of Combinatorial Selections☆10Oct 7, 2024Updated last year
- API for the IGS data portal☆11May 6, 2021Updated 4 years ago
- colored table output in R terminal☆17Sep 27, 2022Updated 3 years ago
- A list of resources for metadata tools, standards and/or development☆11Jun 20, 2018Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Automatically source dotenv files into your Nextflow scope☆10Mar 27, 2026Updated 3 weeks ago
- Singularity port of HLA typing based on an input exome BAM file and is currently infers infers alleles for the three major MHC class I ( …☆14Jan 15, 2017Updated 9 years ago
- Nextflow plugin implementation skeleton☆11Sep 1, 2025Updated 7 months ago
- Read HOMER motif analysis output in R.☆17Mar 1, 2018Updated 8 years ago
- RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows☆17Mar 7, 2022Updated 4 years ago
- Portfolio with data science and machine learning projects I developed during my training in data science.☆10Jan 4, 2021Updated 5 years ago
- For computational analysis of bacterial RNA-seq data☆12Jul 14, 2017Updated 8 years ago
- Flask app for gene over-representation analysis based on Wikidata.☆21Nov 26, 2024Updated last year
- The Pathway Interaction Database (PID) is software supporting the access and display of information about bio-molecular interactions and …☆15Jan 11, 2016Updated 10 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis☆20Nov 18, 2022Updated 3 years ago
- Project for learning R☆18Mar 30, 2019Updated 7 years ago
- Build REST APIs with Django REST Framework and Python☆20Jan 30, 2023Updated 3 years ago
- Residual Component Analysis☆10Jul 4, 2017Updated 8 years ago
- Brief tutorial for using Snakemake to create and submit jobs on a HPC cluster.☆15Mar 22, 2022Updated 4 years ago
- a python library for working with flow cytometry data.☆14May 11, 2015Updated 10 years ago
- American Gut open-access data and IPython notebooks☆128Mar 17, 2017Updated 9 years ago