ICB-DCM / PESTOLinks
PESTO: Parameter EStimation TOolbox, Bioinformatics, btx676, 2017.
☆26Updated 5 years ago
Alternatives and similar repositories for PESTO
Users that are interested in PESTO are comparing it to the libraries listed below
Sorting:
- Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.☆22Updated 7 months ago
- python Parameter EStimation TOolbox☆262Updated this week
- High-performance sensitivity analysis for large ordinary differential equation models☆126Updated this week
- ☆15Updated 8 years ago
- PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology☆60Updated last week
- a collection of modern sparse (regularized) linear regression algorithms.☆65Updated 5 years ago
- A MATLAB toolbox for analysing structural properties of nonlinear models (identifiability, observability, accessibility, controllability)☆31Updated this week
- a modeling environment tailored to parameter estimation in dynamical systems☆61Updated 2 months ago
- distributed, likelihood-free inference☆217Updated 3 months ago
- A Sensitivity and uncertainty analysis toolbox for Python based on the generalized polynomial chaos method☆81Updated last month
- Python-based Derivative-Free Optimization with Bound Constraints☆89Updated this week
- Matlab Toolbox for the Numerical Solution of Stochastic Differential Equations☆103Updated 5 years ago
- Methods for numerical differentiation of noisy data in python☆123Updated last week
- Learning unknown ODE models with Gaussian processes☆26Updated 7 years ago
- PyDSTool main development repo☆176Updated 2 years ago
- Trust Region Optimization in Python☆28Updated 2 years ago
- ABCpy package☆116Updated last year
- Solve ODEs fast, with support for PyMC☆117Updated last year
- Powell's Derivative-Free Optimization solvers.☆105Updated 5 months ago
- Model selection for PEtab☆13Updated last month
- Data-driven dynamical systems toolbox.☆76Updated 2 months ago
- ☆30Updated 7 years ago
- Optimal numerical differentiation of noisy time series data in python.☆65Updated 3 months ago
- Python version of Rick Chartrand's algorithm for numerical differentiation of noisy data☆73Updated 5 years ago
- Dynamic Mode Decomposition☆60Updated 8 years ago
- ☆100Updated 2 years ago
- Companion code in JAX for the paper Parallel Iterated Extended and Sigma-Point Kalman Smoothers.☆27Updated last year
- EigTool is open MATLAB software for analyzing eigenvalues, pseudospectra, and related spectral properties of matrices.☆53Updated 10 years ago
- GPstuff - Gaussian process models for Bayesian analysis☆175Updated 2 years ago
- The ODES scikit for ordinary differential and algebraic equations, an extension to scipy☆128Updated 9 months ago