Alternatives and similar repositories for PESTO

Users that are interested in PESTO are comparing it to the libraries listed below

• ICB-DCM / parPE
  Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.
  ☆22Updated 9 months ago
• aki-nishimura / NUTS-matlab
  ☆15Updated 8 years ago
• Ohjeah / sparsereg
  a collection of modern sparse (regularized) linear regression algorithms.
  ☆65Updated 5 years ago
• ICB-DCM / pyPESTO
  python Parameter EStimation TOolbox
  ☆262Updated this week
• AMICI-dev / AMICI
  High-performance sensitivity analysis for large ordinary differential equation models
  ☆127Updated this week
• afvillaverde / strike-goldd
  A MATLAB toolbox for analysing structural properties of nonlinear models (identifiability, observability, accessibility, controllability)
  ☆32Updated last month
• Data2Dynamics / d2d
  a modeling environment tailored to parameter estimation in dynamical systems
  ☆62Updated 3 months ago
• numericalalgorithmsgroup / pybobyqa
  Python-based Derivative-Free Optimization with Bound Constraints
  ☆90Updated 3 weeks ago
• PEtab-dev / PEtab
  PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology
  ☆60Updated last week
• pygpc-polynomial-chaos / pygpc
  A Sensitivity and uncertainty analysis toolbox for Python based on the generalized polynomial chaos method
  ☆81Updated last week
• cagatayyildiz / npode
  Learning unknown ODE models with Gaussian processes
  ☆27Updated 7 years ago
• pdfo / pdfo
  Powell's Derivative-Free Optimization solvers.
  ☆107Updated 6 months ago
• sklus / d3s
  Data-driven dynamical systems toolbox.
  ☆78Updated last month
• florisvb / PyNumDiff
  Methods for numerical differentiation of noisy data in python
  ☆126Updated last week
• robclewley / pydstool
  PyDSTool main development repo
  ☆176Updated 2 years ago
• erichson / DMDpack
  Dynamic Mode Decomposition
  ☆61Updated 8 years ago
• pints-team / pints
  Probabilistic Inference on Noisy Time Series
  ☆239Updated last month
• kul-optec / ForBES
  Generic and efficient MATLAB solver for nonsmooth optimization problems
  ☆27Updated 9 months ago
• erichanslee / GP_Derivatives
  Scalable Gaussian Process Regression with Derivatives
  ☆38Updated 6 years ago
• tobydriscoll / fnc-extras
  Extra materials for *Fundamentals of Numerical Computation* by Driscoll and Braun.
  ☆171Updated 3 months ago
• gpstuff-dev / gpstuff
  GPstuff - Gaussian process models for Bayesian analysis
  ☆175Updated 2 years ago
• niallmm / Hybrid-SINDy
  Sparse Identification of Nonlinear Dynamics for Hybrid Systems
  ☆26Updated 7 years ago
• RajDandekar / MSML21_BayesianNODE
  ☆40Updated 4 years ago
• ralna / CUTEst
  The Constrained and Unconstrained Testing Environment with safe threads (CUTEst) for optimization software
  ☆123Updated last month
• fides-dev / fides
  Trust Region Optimization in Python
  ☆28Updated last week
• n-takeishi / bayesiandmd
  Bayesian Dynamic Mode Decomposition (Bayesian DMD)
  ☆18Updated 3 years ago
• ChrisRackauckas / universal_differential_equations
  Repository for the Universal Differential Equations for Scientific Machine Learning paper, describing a computational basis for high perf…
  ☆234Updated 2 years ago
• SciML / PolyChaos.jl
  A Julia package to construct orthogonal polynomials, their quadrature rules, and use it with polynomial chaos expansions.
  ☆124Updated 3 months ago
• numericalalgorithmsgroup / dfols
  Python-based Derivative-Free Optimizer for Least-Squares
  ☆42Updated 3 weeks ago
• pymc-devs / sunode
  Solve ODEs fast, with support for PyMC
  ☆117Updated last year