PESTO: Parameter EStimation TOolbox, Bioinformatics, btx676, 2017.
☆27Mar 2, 2020Updated 6 years ago
Alternatives and similar repositories for PESTO
Users that are interested in PESTO are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.☆21Dec 15, 2025Updated 5 months ago
- A collection of mathematical models with experimental data in the PEtab format as benchmark problems in order to evaluate new and existin…☆33Apr 14, 2026Updated last month
- High-performance sensitivity analysis for large ordinary differential equation models☆139Apr 29, 2026Updated 3 weeks ago
- Tool to convert an ODE model specified in the YAML format to SBML.☆12Jun 13, 2023Updated 2 years ago
- Model selection for PEtab☆14Mar 30, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- python Parameter EStimation TOolbox☆273Updated this week
- Create nice documentation for your MatLab project using doxygen☆15Jul 14, 2019Updated 6 years ago
- First-order Algorithm via Linearization of Constraints for OPTimization☆16May 20, 2022Updated 4 years ago
- The SBML Test Suite is a conformance testing system. It allows developers and users to test the degree and correctness of the SBML suppor…☆27Dec 3, 2025Updated 5 months ago
- Convert latex to svg☆12Oct 26, 2022Updated 3 years ago
- Implementation for "Surrogate Losses for Online Learning of Stepsizes in Stochastic Non-Convex Optimization"☆10Aug 3, 2022Updated 3 years ago
- Development repository for Kipet.☆22Aug 23, 2022Updated 3 years ago
- ☆13Apr 7, 2025Updated last year
- Trust Region Optimization in Python☆28Nov 11, 2025Updated 6 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Encoding Dynamic Flux Balance Analysis in SBML☆12Sep 16, 2020Updated 5 years ago
- Distances between heterogeneous tabular data☆25Apr 20, 2026Updated last month
- Nonlinear and Stochastic Optimization. https://ndcbe.github.io/CBE60499/☆18Apr 20, 2023Updated 3 years ago
- Implementation of Arxiv:2212.08549 in Julia☆16Jan 14, 2025Updated last year
- fast, high-resolution lensless imaging in Tensorflow / PyTorch☆24May 14, 2026Updated last week
- The Systems Biology Ontology (SBO) is a set of controlled, relational vocabularies of terms commonly used in Systems Biology, and in part…☆12May 16, 2023Updated 3 years ago
- A python package for learning prior distributions based on expert knowledge☆18Nov 12, 2025Updated 6 months ago
- A reader for MPS and QPS files☆20Aug 17, 2025Updated 9 months ago
- computational tools for the spectroscopic analysis of white dwarfs☆18Mar 25, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- differential evolution (DE), particle swarm optimization (PSO), delayed rejection Markov Chain (MCMC), Metropolis adjusted differential e…☆13Aug 31, 2016Updated 9 years ago
- ☆17Jun 15, 2023Updated 2 years ago
- Ontology of algorithms for analyzing biological models, their parameters, and their outputs☆12Mar 31, 2026Updated last month
- Python framework for Systems Biology modeling☆196Mar 30, 2026Updated last month
- Bayesian data analysis using historical data☆15Nov 14, 2025Updated 6 months ago
- Create parameter estimation problems for ODE models☆70May 12, 2026Updated last week
- A project that create virtual cycling simulator☆17Jan 24, 2019Updated 7 years ago
- Registry of containerized biosimulation tools that support a standard command-line interface☆15Updated this week
- MIGSAA Project 2 - Langevin Monte Carlo Algorithms☆15Jul 25, 2023Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Spectral element method for modeling seismic wave propagation at continental, regional and local scale☆11Jan 7, 2026Updated 4 months ago
- InSAR AWS Cloud Computing Tools☆12Jul 24, 2020Updated 5 years ago
- Experiments calling Julia from Python☆11Jan 28, 2022Updated 4 years ago
- Course Materials for Bayesian Psychometric Modeling☆15May 14, 2019Updated 7 years ago
- This is the fully public version of QSP Toolbox. Please check the README file for the current version of MATLAB that is supported.☆25Dec 29, 2025Updated 4 months ago
- A Python program that fetches seismic waveform data from IRIS and writes to TDengine database.☆11May 29, 2020Updated 5 years ago
- Stats, maps and information about the BattleBit Remastered game☆14Feb 6, 2026Updated 3 months ago