PESTO: Parameter EStimation TOolbox, Bioinformatics, btx676, 2017.
☆27Mar 2, 2020Updated 6 years ago
Alternatives and similar repositories for PESTO
Users that are interested in PESTO are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.☆21Dec 15, 2025Updated 3 months ago
- A collection of mathematical models with experimental data in the PEtab format as benchmark problems in order to evaluate new and existin…☆32Mar 31, 2026Updated last week
- Model selection for PEtab☆14Mar 30, 2026Updated last week
- PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology☆63Mar 27, 2026Updated 2 weeks ago
- ☆15Mar 3, 2017Updated 9 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Create nice documentation for your MatLab project using doxygen☆15Jul 14, 2019Updated 6 years ago
- First-order Algorithm via Linearization of Constraints for OPTimization☆16May 20, 2022Updated 3 years ago
- The SBML Test Suite is a conformance testing system. It allows developers and users to test the degree and correctness of the SBML suppor…☆26Dec 3, 2025Updated 4 months ago
- Convert latex to svg☆12Oct 26, 2022Updated 3 years ago
- Implementation for "Surrogate Losses for Online Learning of Stepsizes in Stochastic Non-Convex Optimization"☆10Aug 3, 2022Updated 3 years ago
- Chinese translation of やたらと察しのいい俺は、毒舌クーデレ美少女の小さなデレも見逃さずにグイグイいく(https://ncode.syosetu.com/n0674fu)☆11Apr 18, 2021Updated 4 years ago
- Development repository for Kipet.☆22Aug 23, 2022Updated 3 years ago
- ☆13Apr 7, 2025Updated last year
- Encoding Dynamic Flux Balance Analysis in SBML☆12Sep 16, 2020Updated 5 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆10Feb 12, 2019Updated 7 years ago
- Nonlinear and Stochastic Optimization. https://ndcbe.github.io/CBE60499/☆18Apr 20, 2023Updated 2 years ago
- The official implementation of DIG-MILP☆14Oct 27, 2023Updated 2 years ago
- Multiple-variance Volterra series Identification Tool☆16Sep 25, 2021Updated 4 years ago
- A reader for MPS and QPS files☆20Aug 17, 2025Updated 7 months ago
- Ontology of algorithms for analyzing biological models, their parameters, and their outputs☆11Mar 31, 2026Updated last week
- differential evolution (DE), particle swarm optimization (PSO), delayed rejection Markov Chain (MCMC), Metropolis adjusted differential e…☆13Aug 31, 2016Updated 9 years ago
- Mirror of lp_solve (http://lpsolve.sourceforge.net/5.5/). Please file a bug if code is out of date.☆27May 7, 2014Updated 11 years ago
- Create parameter estimation problems for ODE models☆69Mar 28, 2026Updated 2 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆18Mar 22, 2026Updated 2 weeks ago
- Registry of containerized biosimulation tools that support a standard command-line interface☆15Mar 30, 2026Updated last week
- MIGSAA Project 2 - Langevin Monte Carlo Algorithms☆15Jul 25, 2023Updated 2 years ago
- Package that provides functionality to run and process, plot and report TRNSYS simulations☆17Mar 24, 2026Updated 2 weeks ago
- This repo contains a PyTorch implementation of the paper: "Simple and Scalable Predictive Uncertainty Estimation using Deep Ensembles"☆16Mar 5, 2022Updated 4 years ago
- MOCCASIN translates basic ODE-based MATLAB models of biological processes into SBML format.☆13Aug 21, 2024Updated last year
- 集学习游戏于一体的儿童教育类软件☆10Oct 28, 2015Updated 10 years ago
- Awesome-spatial-temporal-scientific-machine-learning-data-mining-packages. Julia and Python resources on spatial and temporal data mining…☆14Dec 3, 2022Updated 3 years ago
- Python package for building SBML models without needing to use libSBML.☆11Aug 18, 2021Updated 4 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Code for the ASteCA package.☆22Mar 30, 2026Updated last week
- 智能排产是针对工业企业提供的便捷的排产工具,对接/录入基础静态数据,根据业务订单数据,通过求解器生成订单合理的排产计划☆44Jan 4, 2026Updated 3 months ago
- Admm-based Interior Point Method for Linear Programming☆29Apr 3, 2024Updated 2 years ago
- Data and functions to support Julia projects based on the book "Regression and Other Stories" by Andrew Gelman, Jennifer Hill and Aki Veh…☆26Nov 21, 2025Updated 4 months ago
- Nutmeg – a MIP and CP branch-and-check solver☆33Jun 22, 2023Updated 2 years ago
- This repo contains the code of Transitional Markov chain Monte Carlo algorithm☆23Oct 26, 2022Updated 3 years ago
- Data-driven modeling of chaotic systems in the form of SDEs and nonlinear observation maps☆19Aug 13, 2020Updated 5 years ago