ICB-DCM / pyPESTOLinks
python Parameter EStimation TOolbox
☆261Updated this week
Alternatives and similar repositories for pyPESTO
Users that are interested in pyPESTO are comparing it to the libraries listed below
Sorting:
- High-performance sensitivity analysis for large ordinary differential equation models☆125Updated this week
- distributed, likelihood-free inference☆217Updated 2 months ago
- Trust Region Optimization in Python☆28Updated 2 years ago
- Python wrapper of LSODA (solving ODEs) which can be called from within numba functions.☆98Updated 2 years ago
- Solve ODEs fast, with support for PyMC☆114Updated last year
- PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology☆60Updated 3 weeks ago
- Methods for numerical differentiation of noisy data in python☆122Updated this week
- ☆99Updated 2 years ago
- Chaospy - Toolbox for performing uncertainty quantification.☆467Updated last week
- Solving differential equations in Python using DifferentialEquations.jl and the SciML Scientific Machine Learning organization☆576Updated last week
- Optimal numerical differentiation of noisy time series data in python.☆65Updated 2 months ago
- Leveraging numba to speed up ODE integration☆73Updated last year
- Python version of Rick Chartrand's algorithm for numerical differentiation of noisy data☆73Updated 4 years ago
- Uncertainpy: a Python toolbox for uncertainty quantification and sensitivity analysis, tailored towards computational neuroscience.☆228Updated 2 years ago
- Probabilistic Inference on Noisy Time Series☆239Updated 7 months ago
- Design of experiments for Python☆40Updated last week
- kramersmoyal: Kramers-Moyal coefficients for stochastic data of any dimension, to any desired order☆74Updated 8 months ago
- Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.☆23Updated 6 months ago
- Python package for solving partial differential equations using finite differences.☆444Updated this week
- Numerically solve the Fokker-Planck equation in N dimensions☆93Updated last year
- UQpy (Uncertainty Quantification with python) is a general purpose Python toolbox for modeling uncertainty in physical and mathematical s…☆323Updated 3 weeks ago
- The ODES scikit for ordinary differential and algebraic equations, an extension to scipy☆126Updated 8 months ago
- UM-Bridge (the UQ and Model Bridge) provides a unified interface for numerical models that is accessible from virtually any programming l…☆39Updated this week
- Just-in-Time Compilation for Ordinary Differential Equations☆67Updated 2 months ago
- A Python toolkit for coordinating asynchronous and dynamic ensembles of calculations.☆70Updated last week
- Symbolic Fitting; fitting as it should be.☆244Updated last year
- pyMOR - Model Order Reduction with Python☆325Updated last week
- Python wrapper around cvodes (from the sundials library)☆35Updated last week
- Python 3 framework to facilitate verification, validation and uncertainty quantification (VVUQ) for a wide variety of simulations.☆97Updated last month
- ∫ Straightforward numerical integration of systems of ordinary differential equations☆95Updated 3 weeks ago