ICB-DCM / pyPESTOLinks
python Parameter EStimation TOolbox
☆264Updated this week
Alternatives and similar repositories for pyPESTO
Users that are interested in pyPESTO are comparing it to the libraries listed below
Sorting:
- Python wrapper of LSODA (solving ODEs) which can be called from within numba functions.☆102Updated 2 years ago
- High-performance sensitivity analysis for large ordinary differential equation models☆127Updated this week
- distributed, likelihood-free inference☆217Updated last week
- PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology☆60Updated this week
- Trust Region Optimization in Python☆28Updated 3 weeks ago
- Methods for numerical differentiation of noisy data in python☆127Updated 2 weeks ago
- Solve ODEs fast, with support for PyMC☆117Updated last year
- Optimal numerical differentiation of noisy time series data in python.☆66Updated 5 months ago
- Leveraging numba to speed up ODE integration☆74Updated 2 months ago
- ☆100Updated last month
- Solving differential equations in Python using DifferentialEquations.jl and the SciML Scientific Machine Learning organization☆584Updated last month
- Chaospy - Toolbox for performing uncertainty quantification.☆466Updated 3 months ago
- Just-in-Time Compilation for Ordinary Differential Equations☆68Updated 4 months ago
- UM-Bridge (the UQ and Model Bridge) provides a unified interface for numerical models that is accessible from virtually any programming l…☆38Updated 2 weeks ago
- Python version of Rick Chartrand's algorithm for numerical differentiation of noisy data☆73Updated 5 years ago
- Numerically solve the Fokker-Planck equation in N dimensions☆96Updated last month
- Uncertainpy: a Python toolbox for uncertainty quantification and sensitivity analysis, tailored towards computational neuroscience.☆230Updated 3 years ago
- UQpy (Uncertainty Quantification with python) is a general purpose Python toolbox for modeling uncertainty in physical and mathematical s…☆338Updated last week
- Python package for solving partial differential equations using finite differences.☆449Updated last week
- Probabilistic Inference on Noisy Time Series☆239Updated 2 months ago
- The ODES scikit for ordinary differential and algebraic equations, an extension to scipy☆131Updated 10 months ago
- A Python toolkit for coordinating asynchronous and dynamic ensembles of calculations.☆72Updated this week
- Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.☆22Updated 9 months ago
- Design of experiments for Python☆48Updated last week
- Python wrapper around cvodes (from the sundials library)☆35Updated 2 months ago
- Symbolic Fitting; fitting as it should be.☆244Updated last year
- Python library for parallel multiobjective simulation optimization☆83Updated 2 weeks ago
- kramersmoyal: Kramers-Moyal coefficients for stochastic data of any dimension, to any desired order☆75Updated 11 months ago
- ∫ Straightforward numerical integration of systems of ordinary differential equations☆96Updated 3 months ago
- pyMOR - Model Order Reduction with Python☆333Updated this week