Hekstra-Lab / SFcalculatorLinks
☆20Updated 4 months ago
Alternatives and similar repositories for SFcalculator
Users that are interested in SFcalculator are comparing it to the libraries listed below
Sorting:
- Boltzmann-ranked alternative protein conformations from reduced-MSA AlphaFold2☆59Updated last month
- Convert coarse-grained protein structure to all-atom model☆46Updated 5 months ago
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆50Updated last year
- A benchmark for 3D biomolecular structure prediction models☆67Updated 6 months ago
- ☆69Updated last year
- Deep generative modeling of protein structural ensembles☆29Updated last month
- Benchmarking code accompanying the release of `bioemu`☆47Updated 2 weeks ago
- An open-source platform for developing protein models beyond AlphaFold.☆12Updated 4 months ago
- Composing Unbalanced Flows for Flexible Docking and Relaxation (ICLR 2025)☆52Updated 5 months ago
- mdml: Deep Learning for Molecular Simulations☆47Updated 6 months ago
- Metrics to evaluate distributional coverage of generative models of protein structures.☆17Updated 3 months ago
- Fast, accurate, and deterministic protein side-chain packing☆36Updated 8 months ago
- Precise Generation of Conformational Ensembles for Intrinsically Disordered Proteins with IDPFold☆24Updated last year
- ☆42Updated 3 months ago
- Generate intrinsically disordered peptide conformations via machine learning☆24Updated last year
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆40Updated last year
- ☆28Updated 11 months ago
- ☆45Updated this week
- Structure prediction and design of proteins with noncanonical amino acids☆111Updated this week
- ☆19Updated 7 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆57Updated 6 months ago
- Modelling protein conformational landscape with Alphafold☆54Updated 2 months ago
- ☆36Updated 2 years ago
- workflow used to prepare PPB-Affinity database☆28Updated last year
- ☆42Updated last year
- A framework for training energy-based diffusion models with stable, self-consistent scores near the data distribution.☆64Updated last week
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆33Updated last year
- Tutorials for non-Markovian dynamic models (qMSM and IGME) to study protein dynamics.☆26Updated last year
- ☆31Updated 2 years ago
- Adding hydrogens to molecular models☆50Updated last month