Alternatives and similar repositories for Scientific-LLM-Survey

Users that are interested in Scientific-LLM-Survey are comparing it to the libraries listed below

• QizhiPei / Awesome-Biomolecule-Language-Cross-Modeling
  Awesome-Biomolecule-Language-Cross-Modeling: a curated list of resources for paper "Leveraging Biomolecule and Natural Language through M…
  ☆236Updated this week
• Yijia-Xiao / Protein-LLM-Survey
  Large Language Models in Protein: A Comprehensive Survey
  ☆159Updated 8 months ago
• zjunlp / Mol-Instructions
  [ICLR 2024] Mol-Instructions: A Large-Scale Biomolecular Instruction Dataset for Large Language Models
  ☆288Updated last year
• GENTEL-lab / OriGene
  OriGene: A Self-Evolving Virtual Disease Biologist for Mechanism-Guided Therapeutic Target Discovery
  ☆170Updated 3 months ago
• PKU-YuanGroup / ProLLaMA
  A Protein Large Language Model for Multi-Task Protein Language Processing
  ☆203Updated 2 months ago
• QizhiPei / BioT5
  BioT5 (EMNLP 2023) and BioT5+ (ACL 2024 Findings)
  ☆122Updated last year
• zjunlp / OntoProtein
  [ICLR 2022] OntoProtein: Protein Pretraining With Gene Ontology Embedding
  ☆149Updated 9 months ago
• zjlrock777 / Awesome-LLM-Agents-Scientific-Discovery
  A curated list of LLM powered AI Agents in Biomedical Research. Medical Image Analysis, Multi-omics Genomics Analysis, Biomedical Scienti…
  ☆68Updated 2 months ago
• hadi-abdine / Prot2Text
  ☆39Updated 6 months ago
• apeterswu / Awesome-Bio-Foundation-Models
  A collection of awesome bio-foundation models, including protein, RNA, DNA, gene, single-cell, and so on.
  ☆275Updated 6 months ago
• mims-harvard / TxGNN
  TxGNN: Zero-shot prediction of therapeutic use with geometric deep learning and clinician centered design
  ☆240Updated last year
• myinsilicom / iKraph
  ☆51Updated 7 months ago
• ml4bio / RNA-FM
  Nature Methods: RNA foundation model (together with RhoFold)
  ☆327Updated 6 months ago
• MingyuJ666 / ProLLM
  [COLM'24] We propose Protein Chain of Thought (ProCoT), which replicates the biological mechanism of signaling pathways as language promp…
  ☆70Updated 2 weeks ago
• DeepGraphLearning / ProtST
  [ICML-23 ORAL] ProtST: Multi-Modality Learning of Protein Sequences and Biomedical Texts
  ☆99Updated 2 years ago
• zjunlp / MolGen
  [ICLR 2024] Domain-Agnostic Molecular Generation with Chemical Feedback
  ☆181Updated 11 months ago
• terry-r123 / RNABenchmark
  [NeurIPS 2024] BEACON: Benchmark for Comprehensive RNA Tasks and Language Models
  ☆55Updated last year
• zjunlp / NLP4SciencePapers
  Must-read papers on NLP for science.
  ☆57Updated 2 years ago
• TencentAI4S / CD-GPT
  A Biological Foundation Model Bridging the Gap between Molecular Sequences Through Central Dogma
  ☆28Updated 9 months ago
• biomap-research / xTrimoMultimer
  ☆77Updated 3 years ago
• TencentAILabHealthcare / DNAGPT
  ☆45Updated 2 years ago
• westlake-repl / SaProt
  Saprot: Protein Language Model with Structural Alphabet (AA+3Di)
  ☆547Updated 3 weeks ago
• LucaOne / LucaOne
  The resources of LucaOne, including: the model code, training scripts, embedding inference code, and trained checkpoints.
  ☆332Updated 3 weeks ago
• OmicsML / awesome-AI_Scientist-agents-biology-papers
  ☆46Updated 7 months ago
• ml4bio / RhoFold
  Nature Methods: RhoFold+, Accurate RNA 3D structure prediction using a language model-based deep learning approach
  ☆197Updated 6 months ago
• gersteinlab / CellForge
  ☆122Updated 3 weeks ago
• lbcb-sci / RiNALMo
  RiboNucleic Acid (RNA) Language Model
  ☆141Updated 2 months ago
• ai4protein / ProSST
  🧬 Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)
  ☆141Updated 6 months ago
• westlake-repl / ProTrek
  ProTrek: illuminating the Protein Universe through Trimodal Protein Language Model
  ☆178Updated last week
• PharMolix / LangCell
  Code for "LangCell: Language-Cell Pre-training for Cell Identity Understanding".
  ☆63Updated 11 months ago