srinidhiPY / SSL_CR_HistoLinks
Official code for "Self-Supervised driven Consistency Training for Annotation Efficient Histopathology Image Analysis" Published in Medical Image Analysis (MedIA) Journal, Oct, 2021.
☆62Updated 3 years ago
Alternatives and similar repositories for SSL_CR_Histo
Users that are interested in SSL_CR_Histo are comparing it to the libraries listed below
Sorting:
- MICCAI2020. "Multiple Instance Learning with Center Embeddings for Histopathology Image Classification"☆38Updated 4 years ago
- Use streaming to train whole-slides images with single image-level labels, by reducing GPU memory requirements with 99%.☆80Updated 2 years ago
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆54Updated last year
- Implementation of Cluster-to-Conquer: A Framework for End-to-End Multi-Instance Learning for Whole Slide Image Classification approach.☆61Updated 3 years ago
- This repository includes the codes and descriptions to create a fully annotated dataset of nuclei from cryosectioned histological samples…☆38Updated 2 years ago
- Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024☆138Updated 3 years ago
- Official repository of Benchmarking Self-Supervised Learning on Diverse Pathology Datasets☆87Updated 2 years ago
- CoNIC Challenge☆63Updated last year
- ☆30Updated 5 years ago
- ☆45Updated 2 years ago
- Benchmarking toolkit for patch-based histopathology image classification.☆41Updated 2 years ago
- Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning☆54Updated last year
- Repository for "Gigapixel Whole-Slide Images Classification using Locally Supervised Learning" (MICCAI 2022)☆28Updated 2 years ago
- Histopathology Image Analysis☆92Updated last year
- This repository contains my implementations of the algorithms which MoNuSAC participants could use for data preparation to train their mo…☆64Updated 3 years ago
- Dataset of 9536 H&E-stained patches for colorectal polyps classification and adenomas grading | ICIP21 https://doi.org/10.1109/ICIP42928.…☆33Updated 2 years ago
- Interactive Segmentation of Nucleus☆63Updated 2 years ago
- GPU-accelerated stain normalization command line tool☆21Updated last year
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆67Updated 2 years ago
- SEGmentation using Graphs with Inexact aNd Incomplete labels☆23Updated 3 years ago
- Variance pooling to incorporate ITH in CPath models - MICCAI 2022☆24Updated 2 years ago
- ☆35Updated 2 years ago
- ZoomMIL is a multiple instance learning (MIL) method that learns to perform multi-level zooming for efficient Whole-Slide Image (WSI) cla…☆66Updated 2 years ago
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆53Updated 3 years ago
- Fast and scalable search of whole-slide images via self-supervised deep learning - Nature Biomedical Engineering☆106Updated last year
- Constructed attention-based deep multiple instance learning model using PyTorch and trained on 624 whole slide images of digitized H&E-st…☆19Updated 3 years ago
- ☆61Updated 8 months ago
- [TMI'2021][ISBI MoNuSAC'2020] 11th place solution to Multi-organ nuclei segmentation and classification challenge.☆30Updated 3 years ago
- ☆70Updated 3 years ago
- Sparse Convolutional Context-Aware Multiple Instance Learning for Whole Slide Image Classification | https://arxiv.org/abs/2105.02726☆25Updated 3 years ago