Alternatives and similar repositories for pyTME:

Users that are interested in pyTME are comparing it to the libraries listed below

• czimaginginstitute / GCtfFind
  GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series
  ☆23Updated 9 months ago
• builab / subtomo2Chimera
  ☆18Updated last month
• brisvag / stemia
  Scripts and Tools for Electron Microscopy Image Analysis.
  ☆11Updated 5 months ago
• CellArchLab / cryoet-scripts
  Miscellaneous scripts for processing cryo-ET data
  ☆12Updated last month
• warpem / warp
  ☆47Updated this week
• SBC-Utrecht / pytom-match-pick
  GPU-accelerated template matching for cryo-ET
  ☆33Updated 2 weeks ago
• juglab / cryoCARE_pip
  PIP package of cryoCARE
  ☆29Updated 11 months ago
• alisterburt / autoalign_dynamo
  automated on-the-fly tilt-series alignment
  ☆10Updated 3 years ago
• cryoEM-CNIO / CNIO_Relion_Tools
  ☆22Updated last year
• KudryashevLab / TomoBEAR
  TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…
  ☆28Updated last year
• 3dem / emhub
  Web application for monitor EM results
  ☆12Updated last week
• bionanopatterning / Ais
  ☆15Updated last week
• dtegunov / warp
  ☆16Updated 8 years ago
• sklumpe / SerialFIB
  A Modular Platform for Streamlining Automated Cryo-FIB Workflows
  ☆23Updated 3 weeks ago
• thomasfrosio / emClarity-tutorial
  ☆12Updated last year
• turonova / cryoCAT
  Contextual Analysis Tools for cryoET and subtomogram averaging
  ☆24Updated last week
• DiamondLightSource / python-icebreaker
  Ice gradient estimation for cryoEM
  ☆10Updated 5 months ago
• eisfabian / PACEtomo
  Parallel cryo electron tomography via beam image shift
  ☆32Updated last week
• wright-cemrc-projects / cryoet-montage
  SerialEM, Python, and Unity Simulations for Cryo-Electron Tomography and Montage Tomography.
  ☆15Updated 5 months ago
• maxewilkinson / CryoEM-scripts
  Badly written scripts for making cryoEM easier
  ☆13Updated 4 years ago
• teamtomo / mdocfile
  SerialEM mdoc files as pandas dataframes
  ☆11Updated last month
• carsonpurnell / cryotomosim_CTS
  cryo-EM tomogram simulator
  ☆24Updated last month
• DustinMorado / EPU_group_AFIS
  Makes RELION 3.1 Optics Groups from EPU AFIS data
  ☆17Updated last year
• azazellochg / 3DEM-conventions
  Conventions for 3DEM software packages
  ☆19Updated 3 years ago
• wan-lab-vanderbilt / TOMOMAN
  A set of MATLAB wrapper scripts to help with pre-processing of tomography data.
  ☆18Updated 7 months ago
• alisterburt / dynamo2emClarity
  A tool for conversion between subtomogram averaging softwares Dynamo and emClarity
  ☆9Updated 5 years ago
• KosinskiLab / colabseg
  Jupyter-based tool for membrane segmentation manipulation
  ☆9Updated 11 months ago
• bpowell122 / tomodrgn
  Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms
  ☆24Updated 2 months ago
• alisterburt / dynamo2m
  a bidirectional interface between Dynamo and the Warp-RELION-M pipeline
  ☆16Updated last year
• sami-chaaban / starparser
  Manipulate and mine Relion .star files
  ☆19Updated 4 months ago