Alternatives and similar repositories for bioptools

Users that are interested in bioptools are comparing it to the libraries listed below

• ACRMGroup / bioplib
  The bioplib library
  ☆12Updated 2 years ago
• KULL-Centre / pdbwords
  Printing text using protein structures
  ☆13Updated 4 years ago
• npschafer / openawsem
  An implementation of the AWSEM coarse-grained protein folding forcefield in OpenMM
  ☆37Updated 4 months ago
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆44Updated last year
• mirabdi / PDAnalysis
  ☆32Updated last year
• rcsb / py-rcsbsearchapi
  Python interface for the RCSB PDB search API.
  ☆65Updated 6 months ago
• soedinglab / pdbx
  pdbx is a parser module in python for structures of the protein data bank in the mmcif format
  ☆29Updated last year
• JoaoRodrigues / interfacea
  An open-source library for the analysis of protein interactions.
  ☆29Updated 3 years ago
• harmslab / pytc
  python program for analyzing isothermal titration calorimetry data
  ☆29Updated 6 years ago
• speleo3 / pymol-psico
  Pymol ScrIpt COllection (PSICO)
  ☆60Updated last month
• clauswilke / PeptideBuilder
  A simple Python library to generate model peptides
  ☆88Updated 4 years ago
• pstansfeld / MemProtMD
  ☆45Updated 4 months ago
• molstar / mol-view-spec
  A generic mechanism for describing views used in molecular visualizations
  ☆44Updated last month
• cmbi / dssp
  The DSSP building software
  ☆47Updated 2 years ago
• PDBeurope / arpeggio
  Calculation of interatomic interactions in molecular structures
  ☆107Updated last year
• pamellaccar / gromacs_plumed_hremd
  A step-by-step tutorial to run Molecular Dynamics Simulations with enhanced sampling of a pepitide using PLUMED implemented in GROMACS to…
  ☆14Updated last year
• tlemmin / glycosylator
  Framework for the rapid modeling glycans and glycoproteins.
  ☆31Updated last year
• ExcitedStates / qfit-3.0
  qFit: Automated and unbiased multi-conformer models from X-ray and EM maps.
  ☆45Updated 2 weeks ago
• drorlab / GPCR-mining
  Functions to scrape GPCR data from the web.
  ☆16Updated 3 years ago
• donaldlab / OSPREY3
  Open Source Protein REdesign for You v3
  ☆54Updated 2 months ago
• lightdock / lightdock-rust
  A Rust implementation of the LightDock macromolecular docking software
  ☆29Updated last year
• KULL-Centre / CALVADOS
  ☆71Updated 3 months ago
• gerdos / PyRAMA
  Python implementation of the Ramachandran plot
  ☆52Updated 2 months ago
• PDBeurope / pdbecif
  A lightweight pure python package for reading, writing and manipulating mmCIF files distributed by the wwPDB"
  ☆38Updated last year
• samirelanduk / atomium
  Python macromolecular parsing (with .pdb/.cif/.mmtf parsing and production)
  ☆106Updated last year
• pamellaccar / gromacs_with_packmol
  A fast and simple Molecular Dynamics tutorial using GROMACS and PACKMOL.
  ☆37Updated 2 years ago
• clami66 / AF_unmasked
  Source code and examples for AlphaFold Unmasked
  ☆73Updated 4 months ago
• silicogenesis / protkit
  A Unified Approach to Protein Engineering
  ☆42Updated last year
• ncbi / SSDraw
  ☆85Updated 3 weeks ago
• Rappsilber-Laboratory / AlphaLink2
  AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer
  ☆57Updated last month