Alternatives and similar repositories for bioptools:

Users that are interested in bioptools are comparing it to the libraries listed below

• ACRMGroup / bioplib
  The bioplib library
  ☆12Updated last year
• MobleyLab / Training
  Lab policies, training, style guides, etc.
  ☆35Updated 10 months ago
• sulcgroup / oxdna_analysis_tools
  A set of tools to analyze oxDNA/oxRNA simulations of DNA/RNA
  ☆20Updated 2 years ago
• npschafer / openawsem
  An implementation of the AWSEM coarse-grained protein folding forcefield in OpenMM
  ☆35Updated 6 months ago
• JoaoRodrigues / interfacea
  An open-source library for the analysis of protein interactions.
  ☆29Updated 3 years ago
• pstansfeld / MemProtMD
  ☆33Updated last month
• molstar / mol-view-spec
  ☆19Updated this week
• drorlab / GPCR-mining
  Functions to scrape GPCR data from the web.
  ☆16Updated 3 years ago
• brianjimenez / pydock_tutorial
  PyDock Tutorial
  ☆30Updated 6 years ago
• cabb99 / open3spn2
  An implementation of the 3SPN2 and 3SPN2.C coarse-grained DNA forcefields in OpenMM
  ☆18Updated 9 months ago
• openmm / openmm_workshops
  ☆32Updated 5 months ago
• yakomaxa / PyMOL-Wasm
  PyMOL-wasm port's binary and html/javascript code
  ☆20Updated last year
• bowman-lab / enspara
  Modeling molecular ensembles with scalable data structures and parallel computing
  ☆34Updated last week
• jaredsampson / pymolprobity
  A MolProbity-style visualization plugin for PyMOL
  ☆12Updated 2 years ago
• DSIMB / MEDUSA
  A Deep Learning based protein flexibility prediction tool.
  ☆8Updated 2 years ago
• dkoes / md-scripts
  A collections of scripts for working molecular dynamics simulations
  ☆42Updated 8 months ago
• matteoferla / rdkit_to_params
  Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file
  ☆28Updated 10 months ago
• williamdlees / AmberUtils
  Utilities to assist with Amber Molecular Dynamics structure preparation and MMPBSA.py energy methods
  ☆20Updated 5 years ago
• mobiochem / MoBioTools
  A simple yet versatile toolkit to setup quantum mechanical/molecular mechanical (QM/MM) calculations from molecular dynamics trajectories…
  ☆28Updated last year
• PDBeurope / arpeggio
  Calculation of interatomic interactions in molecular structures
  ☆83Updated 5 months ago
• speleo3 / pymol-psico
  Pymol ScrIpt COllection (PSICO)
  ☆58Updated 6 months ago
• pamellaccar / gromacs_plumed_hremd
  A step-by-step tutorial to run Molecular Dynamics Simulations with enhanced sampling of a pepitide using PLUMED implemented in GROMACS to…
  ☆14Updated 11 months ago
• mirabdi / PDAnalysis
  ☆28Updated last year
• PDBeurope / pdbecif
  A lightweight pure python package for reading, writing and manipulating mmCIF files distributed by the wwPDB"
  ☆36Updated last year
• tlemmin / glycosylator
  Framework for the rapid modeling glycans and glycoproteins.
  ☆29Updated last year
• JoaoRodrigues / git-cheat-sheet
  A simple Git cheat sheet
  ☆7Updated 4 years ago
• srnas / barnaba
  Analyse Nucleic Acids Structure and Simulations with baRNAba
  ☆41Updated 10 months ago
• gersteinlab / STRESS
  ☆8Updated 6 years ago
• bioexcel / biobb
  Biobb (BioExcel building blocks) packages are Python building blocks that create new layer of compatibility and interoperability over pop…
  ☆56Updated last month