Alternatives and similar repositories for QPCR

Users that are interested in QPCR are comparing it to the libraries listed below

• aryeelab / guideseq
  Analysis pipeline for the GUIDE-seq assay.
  ☆81Updated 2 years ago
• tiramisutes / qPCR-Pipeline
  Auto-analysis for Real-Time PCR (qPCR) data
  ☆41Updated 2 years ago
• sequana / sequana
  Sequana: a set of Snakemake NGS pipelines
  ☆152Updated 2 weeks ago
• rajewsky-lab / mirdeep2
  Discovering known and novel miRNAs from small RNA sequencing data
  ☆158Updated 2 months ago
• mikessh / vdjtools
  [Deprecated, see https://github.com/antigenomics/mirpy and other tools @antigenomics] Post-analysis of immune repertoire sequencing data
  ☆142Updated last year
• rnnh / bioinfo-notebook
  🔬 Bioinformatics Notebook. Scripts for bioinformatics pipelines, with quick start guides for programs and video demonstrations.
  ☆203Updated 5 years ago
• simon-anders / htseq
  HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.
  ☆129Updated 5 years ago
• alyssafrazee / ballgown
  Bioconductor package "ballgown", devel version. Isoform-level differential expression analysis in R.
  ☆148Updated 4 years ago
• BioOmics / iSeq
  Download sequencing data and metadata from GSA, SRA, ENA, and DDBJ databases.
  ☆235Updated last week
• igordot / genomics
  A collection of scripts and notes related to genomics and bioinformatics
  ☆219Updated 2 months ago
• YangLab / CIRCexplorer2
  circular RNA analysis toolset
  ☆87Updated last year
• libnano / primer3-py
  Simple oligo analysis and primer design
  ☆190Updated 2 weeks ago
• htseq / htseq
  HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.
  ☆107Updated last week
• shenwei356 / bio_scripts
  Practical, reusable scripts for bioinformatics
  ☆102Updated 6 years ago
• melbournebioinformatics / melbournebioinformatics.github.io
  Melbourne Bioinformatics documentation in markdown format
  ☆120Updated 2 weeks ago
• RabadanLab / arcasHLA
  Fast and accurate in silico inference of HLA genotypes from RNA-seq
  ☆153Updated last year
• nf-core / smrnaseq
  A small-RNA sequencing analysis pipeline
  ☆98Updated last month
• vanheeringen-lab / seq2science
  Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workf…
  ☆167Updated 2 months ago
• tkzeng / Pangolin
  Pangolin is a deep-learning method for predicting splice site strengths.
  ☆85Updated last year
• griffithlab / pVACtools
  ☆168Updated 2 weeks ago
• zhxiaokang / RASflow
  RNA-Seq analysis workflow
  ☆105Updated 4 years ago
• feifei9606 / Awesome-Bioinformatics-CN
  生物信息学软件，资源和工具库的精选列表
  ☆127Updated 3 years ago
• suhrig / arriba
  Fast and accurate gene fusion detection from RNA-Seq data
  ☆259Updated 4 months ago
• beliveau-lab / OligoMiner
  Genome-scale design tool for oligo hybridization probes
  ☆71Updated 4 years ago
• ENCODE-DCC / rna-seq-pipeline
  ☆156Updated 3 years ago
• OpenGene / GeneFuse
  Gene fusion detection and visualization
  ☆131Updated 3 years ago
• MathOnco / NeoPredPipe
  Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan.
  ☆115Updated last year
• liulab-dfci / bioinfo-combio
  The rendered book can be found at https://liulab-dfci.github.io/bioinfo-combio/
  ☆102Updated 3 years ago
• openbiox / bioinformatics-100-days
  Learn and practice the bioinformatics skills in 100 Days.
  ☆80Updated 6 years ago
• Ensembl / VEP_plugins
  Plugins for the Ensembl Variant Effect Predictor (VEP)
  ☆165Updated this week