zqfang / QPCR
Calculate the Delta_Ct, Delta_Delta_Ct , Fold Changes and Student's t-tests from qRT-PCR experiment
☆26Updated 4 years ago
Related projects ⓘ
Alternatives and complementary repositories for QPCR
- A program to automatically process qPCR data from csv files in any PCR machine. To create a normalized table of RNA/DNA quantities, stati…☆42Updated 2 years ago
- Auto-analysis for Real-Time PCR (qPCR) data☆37Updated last year
- Sequana: a set of Snakemake NGS pipelines☆145Updated last month
- circular RNA analysis toolset☆77Updated 2 months ago
- Analysis pipeline for the GUIDE-seq assay.☆77Updated last year
- HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.☆94Updated last week
- Genome-scale design tool for oligo hybridization probes☆58Updated 3 years ago
- A small-RNA sequencing analysis pipeline☆74Updated last week
- Python biomart API☆63Updated last year
- Publication quality NGS track plotting☆108Updated 2 years ago
- Webserver and command line tool for annotating engineered plasmids☆108Updated 7 months ago
- Config files used to define parameters specific to compute environments at different Institutions☆88Updated this week
- Genomic Interactive Visualization Engine☆145Updated last year
- Fast and accurate in silico inference of HLA genotypes from RNA-seq☆121Updated 3 months ago
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆86Updated 2 years ago
- Analysis of Chromosome Conformation Capture data (Hi-C)☆92Updated last month
- coding exercise using TCGA immune infiltration data☆43Updated 9 months ago
- Alternative splicing resource☆51Updated 6 years ago
- integrated RNA-seq Analysis Pipeline☆83Updated 5 years ago
- A simple pythonic interface to biomart.☆55Updated 4 years ago
- Parsing tools for GTF (gene transfer format) files☆110Updated 7 months ago
- parallel-fastq-dump implementation in bash script☆40Updated 4 years ago
- A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.☆39Updated last year
- Regulatory Genomics Toolbox: Python library and set of tools for the integrative analysis of high throughput regulatory genomics data.☆106Updated last week
- EditR: an algorithm for simple and cost effective measurement of base editing by quantifying Sanger trace fluorescence☆31Updated last year
- A simple RNA-Seq differential gene expression pipeline using Nextflow☆95Updated 8 months ago
- Bioconductor package "ballgown", devel version. Isoform-level differential expression analysis in R.☆142Updated 3 years ago
- Plugins for the Ensembl Variant Effect Predictor (VEP)☆141Updated 2 weeks ago
- A combined strategy to identify circular RNAs (circRNAs and ciRNAs) (Zhang et al., Complementary Sequence-Mediated Exon Circularization, …☆60Updated 5 years ago
- ☆25Updated 3 years ago