Official implementation of the Optica 2018 paper "Deep-STORM: super-resolution single-molecule microscopy by deep learning"
☆58Aug 9, 2020Updated 6 years ago
Alternatives and similar repositories for Deep-STORM
Users that are interested in Deep-STORM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Official implementation of the Nature Methods 2020 paper: "DeepSTORM3D: dense 3D localization microscopy and PSF design by deep learning"…☆63Apr 29, 2024Updated 2 years ago
- ☆13Oct 12, 2026Updated 3 weeks ago
- STORM movie analysis code☆123Oct 18, 2026Updated 2 weeks ago
- This is the official implementation of our publication "Deep learning enables fast and dense single-molecule localization with high accur…☆123Jun 22, 2023Updated 3 years ago
- Single-Molecule Localization Microscopy - Software Benchmarking - Challenge 2016☆20Jan 26, 2019Updated 7 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆25Apr 24, 2024Updated 2 years ago
- SOFI simulation tool: a software package for simulating and testing super-resolution optical fluctuation imaging☆16Nov 22, 2016Updated 9 years ago
- ☆31Jun 28, 2023Updated 3 years ago
- ☆16Jul 23, 2024Updated 2 years ago
- SLM binary mask generator for Lattice Light Sheet microscopy☆12Dec 2, 2021Updated 4 years ago
- A collection of tools for painting super-resolution images☆150Oct 24, 2026Updated last week
- Generates colormaps (lookup tables) for MATLAB & ImageJ☆12Mar 14, 2018Updated 8 years ago
- Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging☆94Aug 24, 2026Updated 2 months ago
- ☆83Updated this week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Noise Correction Algorithm for sCMOS cameras☆28Jan 15, 2020Updated 6 years ago
- ThunderSTORM: a comprehensive ImageJ plugin for SMLM data analysis and super-resolution imaging☆110Sep 6, 2018Updated 8 years ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆30Oct 28, 2025Updated last year
- ☆12May 4, 2023Updated 3 years ago
- sample implementation of deeploco☆14Nov 5, 2018Updated 7 years ago
- Code and data belonging to "Raw data to results: a hands-on introduction and overview of computational analysis for single-molecule local…☆11Mar 7, 2022Updated 4 years ago
- STED simulation platform written in Python☆19Oct 4, 2024Updated 2 years ago
- Musical for ImageJ☆11Jul 18, 2023Updated 3 years ago
- Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/☆11Oct 14, 2026Updated 3 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Adaptive Intersection Maximization (AIM) is a high-speed drift correction lgorithm for single molecule localization microscopy.☆13Mar 25, 2026Updated 7 months ago
- rapidSTORM open-source localization microscopy software☆19Jul 6, 2018Updated 8 years ago
- Accelerating Single Molecule Localization Microscopy with Deep Learning☆54Mar 24, 2023Updated 3 years ago
- A style-aware deep learning model for adaptive cell instance segmentation by contrastive fine-tuning.☆10Apr 19, 2024Updated 2 years ago
- ☆11Dec 4, 2019Updated 6 years ago
- Official PyTorch implementation of the "SN2N"☆16Jan 17, 2026Updated 9 months ago
- (ECCVW 2020) Joint Denoising and SR in Microscopy Imaging☆58Jan 5, 2022Updated 4 years ago
- Napari plugin for the reconstruction of Structured Illumination microscopy (SIM) data☆13Nov 4, 2023Updated 3 years ago
- Lattice light-sheet post-processing utility.☆30Updated this week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- OpenSIM matlab code☆60Apr 7, 2016Updated 10 years ago
- Drift estimation☆16Oct 4, 2023Updated 3 years ago
- ExTrack MLE for diffusive noisy single-particle tracks☆16Sep 18, 2026Updated last month
- Correction of nonlinear and linear scanning probe artifacts using orthogonal scan pairs.☆13Jan 27, 2021Updated 5 years ago
- This Toolbox is build for 3D correlative microscopy. It helps with 3D to 2D correlation of three dimensional confocal image stacks to two…☆14Apr 27, 2020Updated 6 years ago
- Source code of SACD(Super-resolution with Auto-Correlation two-step Deconvolution)☆13Dec 12, 2022Updated 3 years ago
- Localization analysis software for super-resolution microscopy☆24Updated this week