Alternatives and similar repositories for aitom

Users that are interested in aitom are comparing it to the libraries listed below

• marrlab / SHAPR
  SHAPR - An AI approach to predict 3D cell shapes from 2D microscopic images
  ☆14Updated 2 years ago
• SMLC-NYSBC / TARGET-VAE
  Source code for "Unsupervised Object Representation Learning using Translation and Rotation Group Equivariant VAE," in pytorch. NeurIPS 2…
  ☆17Updated 2 years ago
• marrlab / DISPR
  A Diffusion Model Predicts 3D Shapes from 2D Microscopy Images
  ☆38Updated 2 years ago
• compSPI / cryoAI
  ☆43Updated last year
• zudi-lin / pytorch_connectomics
  PyTorch Connectomics: segmentation toolbox for EM connectomics
  ☆179Updated last month
• rsanchezgarc / micrograph_cleaner_em
  Cryo-EM micrograph segmentation through deep learning
  ☆21Updated last month
• anmartinezs / polnet
  Generates synthetic datasets for Cryo-Electron Tomography
  ☆28Updated this week
• xulabs / projects
  ☆42Updated 2 years ago
• anmartinezs / pyseg_system
  De novo analysis for cryo-electron tomography
  ☆22Updated 8 months ago
• icthrm / SC-Net
  ☆26Updated 10 months ago
• swing-research / Implicit-Cryo-Electron-Tomography
  ☆13Updated last month
• zhonge / cryodrgn_empiar
  ☆30Updated 4 years ago
• tbepler / topaz
  Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled …
  ☆190Updated last week
• bowang-lab / MAESTER
  Masked Autoencoder Guided Segmentation at Pixel Resolution
  ☆15Updated last year
• KarenUllrich / Pytorch-Backprojection
  This code accompanies "Differentiable probabilistic models of scientific imaging with the Fourier slice theorem", UAI 2019
  ☆37Updated 6 years ago
• BioinfoMachineLearning / cryoppp
  The programs of creating cryo-EM particle picking datasets
  ☆75Updated last year
• CellArchLab / MemBrain
  ☆32Updated 2 years ago
• IsoNet-cryoET / IsoNet
  Self-supervised learning for isotropic cryoET reconstruction
  ☆82Updated 6 months ago
• ml-struct-bio / cryodrgn
  Neural networks for cryo-EM reconstruction
  ☆341Updated this week
• phonchi / Computational-CryoEM
  A curated list of awesome computational cryo-EM methods.
  ☆127Updated 4 months ago
• ml-struct-bio / cryofire
  Amortized inference for ab initio heterogeneous cryo-EM reconstruction
  ☆38Updated 2 years ago
• Zhang-hn1125 / REST
  ☆16Updated 8 months ago
• kalemaria / pycurv
  Reliable estimation of membrane curvature for cryo-electron tomography
  ☆20Updated last week
• kuixu / awesome-cryoem
  A collaborative list of awesome CryoEM (Cryo Electron Microscopy) resources.
  ☆145Updated 4 years ago
• jianlin-cheng / CryoSegNet
  Customized foundational image segmentation models for picking protein particles in cryo-EM images
  ☆18Updated 2 weeks ago
• kreshuklab / spoco
  PyTorch implementation of SPOCO
  ☆32Updated 11 months ago
• deep-finder / cryoet-deepfinder
  Macromolecules Localization and Identification in 3D Cellular Cryo-Electron Tomograms
  ☆9Updated 11 months ago
• MLI-lab / DeepDeWedge
  Self-supervised deep learning for denoising and missing wedge reconstruction of cryo-ET tomograms
  ☆41Updated 2 weeks ago
• bionanopatterning / scNodes
  ☆14Updated 4 months ago
• funkey / waterz
  Simple watershed and agglomeration library for affinity graphs.
  ☆25Updated 8 months ago