📊 A working, maintained copy of ggpy
☆31Jul 11, 2019Updated 7 years ago
Alternatives and similar repositories for ggpy
Users that are interested in ggpy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- a cythonized, extended version of the interval search tree in bx☆30Jun 4, 2019Updated 7 years ago
- Sweep-line algorithm for genomic features. Detect overlaps on large files w/ minimal memory.☆10Sep 13, 2011Updated 15 years ago
- Explore and analyze biological sequence data☆19Aug 1, 2024Updated 2 years ago
- 🎯 Generate DNA sequences with specified amino acid, codon, and k-mer frequencies☆17Jan 23, 2023Updated 3 years ago
- Bedfile perturbation tool☆17Mar 6, 2026Updated 7 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Python for Command Line Oneliners☆19Jan 5, 2015Updated 11 years ago
- Ultrafast interval trees from the kernel. Deprecated in favor of the NCLS.☆26Apr 8, 2019Updated 7 years ago
- Gencode UTR fix☆17Jan 11, 2023Updated 3 years ago
- Python-based UCSC genome browser snapshot-taker and gallery-maker☆12May 21, 2024Updated 2 years ago
- Simple interval class for fast fasta access☆10Jun 18, 2012Updated 14 years ago
- A file watcher written in Rust☆11May 4, 2026Updated 5 months ago
- Example using R on Amazon ec2☆10Jun 22, 2020Updated 6 years ago
- ☆16Nov 16, 2020Updated 5 years ago
- LAAVA: Long-read AAV Analysis☆13Dec 9, 2025Updated 10 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A lightweight Python library for distributed computing on Sun Grid Engines☆21Oct 22, 2020Updated 6 years ago
- ☆15Mar 26, 2019Updated 7 years ago
- A method to locate variation clusters☆11Nov 27, 2025Updated 10 months ago
- Rust Backend for PyRanges Operations. More featureful and much faster replacement for the NCLS library☆35Aug 13, 2026Updated 2 months ago
- Lab notebook for people who like the command line.☆11Mar 6, 2026Updated 7 months ago
- ☆14Oct 14, 2026Updated last week
- Experimental getopt, gzip reader, FASTA/Q parser and interval queries in nim-lang☆31Apr 20, 2020Updated 6 years ago
- Index and query k-mer matrices in BGZF☆12Apr 30, 2018Updated 8 years ago
- Scripts for normalizing coverage in samples with highly amplified regions☆10Jan 19, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Contains the description of a file format to store kmers and associated values☆34Aug 17, 2022Updated 4 years ago
- Variant Effect Prediction for Python☆16Apr 5, 2017Updated 9 years ago
- Single command serverless ETL orchestration.☆14Jul 19, 2026Updated 3 months ago
- Source code for ASRU 2019 paper "Adapting Pretrained Transformer to Lattices for Spoken Language Understanding"☆10Jul 8, 2020Updated 6 years ago
- ☆13Aug 21, 2025Updated last year
- ONEcode package to replace SAM/BAM, especially for eDNA mapping to everything☆20Aug 17, 2026Updated 2 months ago
- HTML Abstract Markup Language for Julia. Inspired by Ruby's HAML.☆17Aug 23, 2026Updated last month
- Various JSFX plugins for REAPER.☆14Jul 3, 2019Updated 7 years ago
- Next generation of SuRVoS☆10Oct 11, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- zsh plugin to list up EC2 instances and ssh login the instances.☆12Jun 12, 2026Updated 4 months ago
- CLI to automate Nextflow pipeline testing☆13Dec 15, 2025Updated 10 months ago
- ☆19Aug 15, 2026Updated 2 months ago
- Numerical Run Length Encoding and Arithmetic in Cython☆19Oct 14, 2026Updated last week
- Command line utility for working with next-generation sequencing files.☆39Jun 24, 2025Updated last year
- Compressed, associative, and exact hash table for k-mers☆11Oct 15, 2026Updated last week
- ☆15Jan 22, 2023Updated 3 years ago