📊 A working, maintained copy of ggpy
☆31Jul 11, 2019Updated 7 years ago
Alternatives and similar repositories for ggpy
Users that are interested in ggpy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Bam to Pandas DataFrame, quickly☆13May 10, 2025Updated last year
- a cythonized, extended version of the interval search tree in bx☆30Jun 4, 2019Updated 7 years ago
- Sweep-line algorithm for genomic features. Detect overlaps on large files w/ minimal memory.☆10Sep 13, 2011Updated 14 years ago
- Explore and analyze biological sequence data☆17Aug 1, 2024Updated last year
- 🎯 Generate DNA sequences with specified amino acid, codon, and k-mer frequencies☆17Jan 23, 2023Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Bedfile perturbation tool☆17Mar 6, 2026Updated 4 months ago
- Python for Command Line Oneliners☆19Jan 5, 2015Updated 11 years ago
- Ultrafast interval trees from the kernel. Deprecated in favor of the NCLS.☆26Apr 8, 2019Updated 7 years ago
- Python-based UCSC genome browser snapshot-taker and gallery-maker☆12May 21, 2024Updated 2 years ago
- Gencode UTR fix☆17Jan 11, 2023Updated 3 years ago
- A file watcher written in Rust☆11May 4, 2026Updated 2 months ago
- Example using R on Amazon ec2☆10Jun 22, 2020Updated 6 years ago
- LAAVA: Long-read AAV Analysis☆13Dec 9, 2025Updated 7 months ago
- Lab notebook for people who like the command line.☆11Mar 6, 2026Updated 4 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A small library for ranges/intervals, for use with genomic data.☆17Nov 27, 2012Updated 13 years ago
- Experimental getopt, gzip reader, FASTA/Q parser and interval queries in nim-lang☆31Apr 20, 2020Updated 6 years ago
- Rust Backend for PyRanges Operations. More featureful and much faster replacement for the NCLS library☆33Updated this week
- Contains the description of a file format to store kmers and associated values☆34Aug 17, 2022Updated 3 years ago
- Benchmark structural variant calls against a reference set☆18Jan 26, 2026Updated 6 months ago
- Command line utility for working with next-generation sequencing files.☆39Jun 24, 2025Updated last year
- Various JSFX plugins for REAPER.☆14Jul 3, 2019Updated 7 years ago
- zsh plugin to list up EC2 instances and ssh login the instances.☆12Jun 12, 2026Updated last month
- WPG: WavePropaGator, Interactive framework for X-ray FEL optics design and simulations.☆30Dec 29, 2025Updated 7 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Variant Effect Prediction for Python☆16Apr 5, 2017Updated 9 years ago
- ONEcode package to replace SAM/BAM, especially for eDNA mapping to everything☆18Jun 27, 2026Updated last month
- Numerical Run Length Encoding and Arithmetic in Cython☆19Jan 28, 2026Updated 6 months ago
- HTML Abstract Markup Language for Julia. Inspired by Ruby's HAML.☆17Aug 17, 2023Updated 2 years ago
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes☆19Apr 2, 2020Updated 6 years ago
- Fishers Exact Test for Python (Cython)☆66May 26, 2026Updated 2 months ago
- Split a BAM file by haplotype support☆16Dec 13, 2017Updated 8 years ago
- Library for visualising genomic features in Python.☆16May 12, 2017Updated 9 years ago
- Benchmarking variant calling in polyploids☆16Nov 26, 2021Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆15Jan 22, 2023Updated 3 years ago
- HDR-MRI Algorithms from "Local contrast-enhanced MR images via high dynamic range processing" published in MRM☆17Nov 13, 2018Updated 7 years ago
- Cromwell output organizer☆13May 18, 2021Updated 5 years ago
- ☆12Aug 4, 2024Updated last year
- Lazy import python modules for low start-up time. (Taken from mercurial.)☆52Jul 15, 2024Updated 2 years ago
- Julia machine learning environment☆14Feb 6, 2019Updated 7 years ago
- edit distance sequence tags and helpers☆12Feb 4, 2021Updated 5 years ago