π A working, maintained copy of ggpy
β31Jul 11, 2019Updated 7 years ago
Alternatives and similar repositories for ggpy
Users that are interested in ggpy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Bam to Pandas DataFrame, quicklyβ13May 10, 2025Updated last year
- a cythonized, extended version of the interval search tree in bxβ30Jun 4, 2019Updated 7 years ago
- Sweep-line algorithm for genomic features. Detect overlaps on large files w/ minimal memory.β10Sep 13, 2011Updated 14 years ago
- Explore and analyze biological sequence dataβ19Aug 1, 2024Updated 2 years ago
- π― Generate DNA sequences with specified amino acid, codon, and k-mer frequenciesβ17Jan 23, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer β’ AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Bedfile perturbation toolβ17Mar 6, 2026Updated 6 months ago
- Python for Command Line Onelinersβ19Jan 5, 2015Updated 11 years ago
- Ultrafast interval trees from the kernel. Deprecated in favor of the NCLS.β26Apr 8, 2019Updated 7 years ago
- Python-based UCSC genome browser snapshot-taker and gallery-makerβ12May 21, 2024Updated 2 years ago
- Gencode UTR fixβ17Jan 11, 2023Updated 3 years ago
- A file watcher written in Rustβ11May 4, 2026Updated 4 months ago
- A lightweight Python library for distributed computing on Sun Grid Enginesβ21Oct 22, 2020Updated 5 years ago
- LAAVA: Long-read AAV Analysisβ13Dec 9, 2025Updated 9 months ago
- Lab notebook for people who like the command line.β11Mar 6, 2026Updated 6 months ago
- Deploy on Railway without the complexity - Free Credits Offer β’ AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A small library for ranges/intervals, for use with genomic data.β17Nov 27, 2012Updated 13 years ago
- Rust Backend for PyRanges Operations. More featureful and much faster replacement for the NCLS libraryβ33Aug 13, 2026Updated 3 weeks ago
- Contains the description of a file format to store kmers and associated valuesβ34Aug 17, 2022Updated 4 years ago
- Benchmark structural variant calls against a reference setβ18Jan 26, 2026Updated 7 months ago
- Command line utility for working with next-generation sequencing files.β39Jun 24, 2025Updated last year
- CLI to automate Nextflow pipeline testingβ13Dec 15, 2025Updated 8 months ago
- zsh plugin to list up EC2 instances and ssh login the instances.β12Jun 12, 2026Updated 2 months ago
- Variant Effect Prediction for Pythonβ16Apr 5, 2017Updated 9 years ago
- Wrappers to tmux commands, usefull for tmux based automationβ16Mar 11, 2022Updated 4 years ago
- GPUs on demand by Runpod - Special Offer Available β’ AdRun AI, ML, and HPC workloads on powerful cloud GPUsβwithout limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Numerical Run Length Encoding and Arithmetic in Cythonβ19Aug 2, 2026Updated last month
- HTML Abstract Markup Language for Julia. Inspired by Ruby's HAML.β17Aug 23, 2026Updated 2 weeks ago
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypesβ19Apr 2, 2020Updated 6 years ago
- Robust individual and aggregate checksums for nucleotide sequencesβ18Mar 3, 2026Updated 6 months ago
- Fishers Exact Test for Python (Cython)β66Jul 29, 2026Updated last month
- Split a BAM file by haplotype supportβ16Dec 13, 2017Updated 8 years ago
- Library for visualising genomic features in Python.β16May 12, 2017Updated 9 years ago
- A hobbyist UEFI x86-64/long-mode Operating System.β11Apr 3, 2023Updated 3 years ago
- Enforce Rust documentation correctnessβ14Dec 1, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer β’ AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Lazy import python modules for low start-up time. (Taken from mercurial.)β52Jul 15, 2024Updated 2 years ago
- Alfred 4 workflow for opening your GitHub Gists in your default browser.β16Apr 4, 2022Updated 4 years ago
- Julia machine learning environmentβ14Feb 6, 2019Updated 7 years ago
- This repository implements models described in ''Interpretale Word Embeddings via Informative Priors''β11Aug 29, 2019Updated 7 years ago
- An alfred workflow for number system convertβ16Aug 21, 2013Updated 13 years ago
- Library for indexing VCF files for random access searches by rsIDβ17Mar 2, 2026Updated 6 months ago
- Code and dataset for Polyglot Prompting: Multilingual Multitask Prompt Training.β18Dec 7, 2022Updated 3 years ago