Alternatives and similar repositories for benchmark-hdf5-clustering:

Users that are interested in benchmark-hdf5-clustering are comparing it to the libraries listed below

• kstreet13 / scry
  Collection of analysis methods for small count data generated by rafalab members (the methods, not the data).
  ☆19Updated 6 months ago
• timothy-barry / ondisc
  Space- and time-optimal algorithms for large single-cell expression matrices, with a focus on single-cell CRISPR screens.
  ☆11Updated 9 months ago
• jchiquet / aricode
  R package for computation of (adjusted) rand-index and other such scores
  ☆25Updated 11 months ago
• Bioconductor / S4Vectors
  Foundation of vector-like and list-like containers in Bioconductor
  ☆18Updated 3 weeks ago
• lucylgao / clusterpval
  ☆16Updated last year
• lgatto / tidies
  A Grammar of Data Manipulation for Omics Data
  ☆21Updated 4 years ago
• mtmorgan / TENxGenomics
  Interface to 10x Genomics' 1.3 m single cell data set
  ☆18Updated 6 years ago
• csoneson / treeclimbR
  ☆20Updated last month
• PeteHaitch / DelayedMatrixStats
  A port of the matrixStats API to work with DelayedMatrix objects from the DelayedArray package
  ☆15Updated 3 weeks ago
• csoneson / iCOBRA
  Interactive benchmarking of ranking and assignment methods
  ☆14Updated last month
• seandavi / BiocPkgTools
  Computable build reports, package metadata, and download stats from the Bioconductor project
  ☆20Updated 2 months ago
• dcgerard / vicar
  Various Ideas for Confounder Adjustment in Regression
  ☆23Updated last year
• caleblareau / immune_cell_signature_genes
  Repository for signature genes from Immune Cell Atlas
  ☆18Updated 5 years ago
• Bioconductor / BioC2020
  BioC2020: Where Software and Biology Connect
  ☆12Updated last year
• const-ae / sparseMatrixStats
  Implementation of the matrixStats API for sparse matrices
  ☆54Updated 7 months ago
• kharchenkolab / vrnmf
  Volume-regularized NMF
  ☆17Updated 2 years ago
• Shians / CellBench
  R package for benchmarking single cell analysis methods
  ☆30Updated last year
• shchurch / countland
  tools in python and R for analyzing biological count data, especially from single cell RNAseq
  ☆22Updated 11 months ago
• QuantGen / BGData
  A Suite of Packages for Analysis of Big Genomic Data
  ☆34Updated last week
• lianos / multiGSEA
  NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …
  ☆21Updated 4 years ago
• stephenslab / gtexresults
  Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic stud…
  ☆23Updated last year
• pachterlab / bears_analyses
  Examples of kallisto + sleuth
  ☆11Updated 7 years ago
• HenrikBengtsson / git-bioc
  LEGACY: Git commands to keep a Git repository and Bioconductor SVN in sync
  ☆10Updated 8 years ago
• Shians / BiocExplorer
  ☆11Updated 6 years ago
• LieberInstitute / megadepth
  R interface to megadepth: BigWig and BAM related utilities
  ☆12Updated last month
• haotian-zhuang / findPC
  Automatic selection of number of principal components
  ☆14Updated 2 years ago
• stephaniehicks / methylCC
  R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms
  ☆19Updated 2 years ago
• Bioconductor / BiocStyle
  Issues and pull requests for BiocStyle should go here.
  ☆12Updated 3 months ago
• tidyomics / tidyomicsBlog
  the manifesto, workshops and tutorials of the tidy transcriptomics
  ☆12Updated 8 months ago
• dynverse / dynwrap
  A common data format and inference environment for single-cell trajectories 📦
  ☆15Updated last year