stefan-schroedl / tabulatorLinks
A set of Unix shell command line tools for quick and convenient batch processing of tabular text files (a.k.a., tab-delimited, tsv, csv, or flat data file format) with a header line. Provides column reference by name, automatic delimiter and compression detection for per-line transformations, sql-like group-by operation and relational join.
☆35Updated 10 years ago
Alternatives and similar repositories for tabulator
Users that are interested in tabulator are comparing it to the libraries listed below
Sorting:
- mirror of GNU Datamash. Send questions/comments/bugs to bug-datamash@gnu.org☆77Updated last month
- Unix terminal histograms, sequencing depth and bar charts (hissyfit). Small data/file munge, morph, find and count scripts/functions in v…☆21Updated 3 months ago
- Convenience function for quick and dirty data analysis☆69Updated 8 years ago
- Enables common unix utlities like cut, awk, wc, head to work correctly with csv data containing delimiters and newlines☆451Updated 2 years ago
- Log shell-commands and used files. Snapshot executed scripts. Fully automatic.☆206Updated 9 months ago
- Useful FILe and stream Operations☆45Updated 10 years ago
- My xslt sandbox☆41Updated 2 months ago
- Automate new Mac setup☆24Updated 3 weeks ago
- Write-once-read-many table for large datasets.☆27Updated 2 years ago
- Vince Buffalo's devnotes — ½ TIL, ½ notebook☆115Updated 9 years ago
- Library of snakemake rules.☆12Updated 7 years ago
- an easy deindex tool for illumina multiple barcodes sequencing☆12Updated 10 years ago
- Genomics Research Container Architecture☆48Updated 6 years ago
- AWK and Bash code to easily parse CSV files, with possibly embedded commas and quotes.☆54Updated 7 years ago
- Deprecated☆101Updated 6 years ago
- Useful small programs☆28Updated 13 years ago
- Blacktie: a streamlined interface to the popular tophat/cufflinks RNA-seq pipeline☆26Updated 10 years ago
- A basic bash port of a Test::More/Test::Builder-style TAP-compliant test library.☆30Updated 9 years ago
- Scripts for miscelleneous bioinformatics tasks☆49Updated 5 years ago
- This is a beginner's tutorial to Snakemake☆70Updated 9 years ago
- A practical cross-platform command-line tool for safely batch renaming files/directories via regular expression☆296Updated 5 months ago
- a simple read-only sequence database, designed for short reads☆65Updated 2 years ago
- Performs memory-efficient reservoir sampling on very large input files delimited by newlines☆69Updated 5 years ago
- A utility for sorting really big files. http://kmkeen.com/gz-sort/☆94Updated 7 years ago
- My dotfiles, with simple install script.☆54Updated 3 years ago
- Mulled - Automatized Containerized Software Repository☆66Updated last year
- A package for creating and managing sample identifiers in comparative -omics datasets.☆23Updated 9 years ago
- Simple command line arguments parser for BASH☆164Updated 4 years ago
- CloudBioLinux: configure virtual (or real) machines with tools for biological analyses☆257Updated 2 years ago
- Python-based UCSC genome browser snapshot-taker and gallery-maker☆12Updated last year