stefan-schroedl / tabulatorLinks
A set of Unix shell command line tools for quick and convenient batch processing of tabular text files (a.k.a., tab-delimited, tsv, csv, or flat data file format) with a header line. Provides column reference by name, automatic delimiter and compression detection for per-line transformations, sql-like group-by operation and relational join.
☆35Updated 10 years ago
Alternatives and similar repositories for tabulator
Users that are interested in tabulator are comparing it to the libraries listed below
Sorting:
- mirror of GNU Datamash. Send questions/comments/bugs to bug-datamash@gnu.org☆77Updated last week
- quickly plot a histogram on the CLI☆47Updated 3 years ago
- Unix terminal histograms, sequencing depth and bar charts (hissyfit). Small data/file munge, morph, find and count scripts/functions in v…☆20Updated 2 months ago
- Convenience function for quick and dirty data analysis☆69Updated 8 years ago
- Enables common unix utlities like cut, awk, wc, head to work correctly with csv data containing delimiters and newlines☆451Updated 2 years ago
- better(?) xargs in go☆147Updated 7 years ago
- Vince Buffalo's devnotes — ½ TIL, ½ notebook☆115Updated 9 years ago
- Useful FILe and stream Operations☆45Updated 9 years ago
- Write-once-read-many table for large datasets.☆27Updated 2 years ago
- A practical cross-platform command-line tool for safely batch renaming files/directories via regular expression☆297Updated 3 months ago
- My xslt sandbox☆42Updated 2 weeks ago
- a simple read-only sequence database, designed for short reads☆66Updated last year
- Automate new Mac setup☆23Updated 3 weeks ago
- A utility for sorting really big files. http://kmkeen.com/gz-sort/☆94Updated 7 years ago
- A fast, feature-rich CSV/TSV/delimited file viewer for the command line☆107Updated 3 weeks ago
- Beautiful correlation plots for the terminal☆61Updated 2 years ago
- Blacktie: a streamlined interface to the popular tophat/cufflinks RNA-seq pipeline☆26Updated 10 years ago
- Library of snakemake rules.☆12Updated 7 years ago
- python stuff I use☆19Updated 5 years ago
- An example of a data analysis pipeline using Make☆17Updated 9 years ago
- Performs memory-efficient reservoir sampling on very large input files delimited by newlines☆69Updated 5 years ago
- A tool for running bioinformatics workflows locally or in the cloud.☆30Updated 6 years ago
- A library for GNU make to schedule rules as jobs with qsub or sbatch☆11Updated 12 years ago
- Snakemake library for bioinformatics programs, with a focus on next-generation sequencing☆22Updated 9 years ago
- This project contains simple methods to measure sample relatedness and identify potential swaps and contamination☆10Updated 9 years ago
- This is a beginner's tutorial to Snakemake☆70Updated 9 years ago
- Parallel Block GZIP☆50Updated 9 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- Simple tool to verticalize text delimited files.☆37Updated last year
- Deprecated☆100Updated 6 years ago