fran-martinez / bio_ner_bert
BERT finetuned on NER downstream tasks
☆14Updated last year
Alternatives and similar repositories for bio_ner_bert:
Users that are interested in bio_ner_bert are comparing it to the libraries listed below
- a large-scale high-quality medical dialogue dataset☆89Updated 2 years ago
- The data and codes for the baseline setting of medical chatbox.☆47Updated 3 years ago
- Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]☆65Updated 2 years ago
- Codes for the EMNLP'2020 paper "Predicting Clinical Trial Results by Implicit Evidence Integration".☆14Updated 4 years ago
- SMedBERT: A Knowledge-Enhanced Pre-trained Language Model withStructured Semantics for Medical Text Mining☆78Updated 3 years ago
- ☆24Updated 3 years ago
- Implementation of AAAI 21 paper: Nested Named Entity Recognition with Partially Observed TreeCRFs☆52Updated 3 years ago
- Fusing Heterogeneous Factors with Triaffine Mechanism for Nested Named Entity Recognition [ACL 2022 Findings]☆44Updated 2 years ago
- Repository for ACL2021 paper: <Zero-shot Event Extraction via Transfer Learning: Challenges and Insights>.☆29Updated 2 years ago
- code&data for MIE: A Medical Information Extractor towards Medical Dialogues, ACL 2020☆52Updated 4 years ago
- ☆46Updated 3 years ago
- Code and dataset of EMNLP 2020 paper "Infusing Disease Knowledge into BERT for Health Question Answering, Medical Inference and Disease N…☆68Updated 3 years ago
- 第五届中国健康信息处理会议(CHIP2019)- 评测三:临床试验筛选标准短文本分类☆39Updated 2 years ago
- ☆39Updated 2 years ago
- [ACL 2020] Structure-Level Knowledge Distillation For Multilingual Sequence Labeling☆71Updated 2 years ago
- ExpMRC: Explainability Evaluation for Machine Reading Comprehension☆62Updated last year
- Code for the paper Biomedical Event Extraction with Hierarchical Knowledge Graphs☆61Updated 2 years ago
- METS-CoV: a dataset containing Medical Entities and Targeted Sentiments on CoVid-19-related tweets☆38Updated last year
- ☆32Updated 3 years ago
- Official Code For TDEER: An Efficient Translating Decoding Schema for Joint Extraction of Entities and Relations (EMNLP 2021)☆42Updated 8 months ago
- [CCKS 2021] On Robustness and Bias Analysis of BERT-based Relation Extraction☆27Updated 3 years ago
- ☆53Updated 3 years ago
- Code accompanying Coling2020 publication on data augmentation for named entity recognition☆34Updated 3 years ago
- The depository support training and testing BERT-CNN model on three medical relation extraction corpora: BioCreative V CDR task corpus, t…☆73Updated 5 years ago
- A project for developing transformer-based models for clinical relation extraction☆127Updated last year
- The source code for 'Noisy-Labeled NER with Confidence Estimation' accepted by NAACL 2021☆34Updated 3 years ago
- A Keras implementation of the AAAI21 paper "a lightweight neural model for biomedical entity linking"☆53Updated 2 years ago
- Paper notes for Information Extraction, including Relation Extraction (RE), Named Entity Recognition (NER), Entity Linking (EL), Event Ex…☆17Updated 4 years ago
- Generate-and-Rank Framework with Semantic Type Regularization for Biomedical Concept Normalization☆25Updated 4 years ago
- BioBART: Pretraining and Evaluation of A Biomedical Generative Language Model [ACL-BioNLP 2022]☆52Updated 2 years ago