Alternatives and similar repositories for GPrimer

Users that are interested in GPrimer are comparing it to the libraries listed below

• LKremer / showTree
  showTree can visualize the phylogeny, protein sequences and protein domains of a gene family in one figure.
  ☆32Updated 6 years ago
• DMU-lilab / pTrimmer
  Used to trim off the primer sequence from mutiplex amplicon sequencing
  ☆24Updated last year
• rvolden / C3POa
  Computational pipeline for calling consensi on R2C2 nanopore data
  ☆31Updated 3 years ago
• liuyigh / PyHRM
  High Resolution Melt Analysis in Python
  ☆21Updated 3 years ago
• zichner / primerDesign
  A tool to design highly specific PCR primers for the validation of genomic alterations including structural variants
  ☆47Updated 8 years ago
• BackofenLab / IntaRNA
  Efficient target prediction incorporating accessibility of interaction sites
  ☆49Updated 2 months ago
• becavin-lab / bacnet
  BACNET is a Java based platform to develop website for multi-omics analysis
  ☆13Updated 2 years ago
• aakechin / NGS-PrimerPlex
  NGS-PrimerPlex is a high-throughput tool for mupltiplex primer design
  ☆63Updated 6 months ago
• pinellolab / CRISPRitz
  Tool package to perform in-silico CRISPR analysis and assessment
  ☆33Updated last week
• thekaplanlab / msabrowser
  🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations
  ☆35Updated last year
• mourisl / Rcorrector
  Error correction for Illumina RNA-seq reads
  ☆67Updated last year
• Edinburgh-Genome-Foundry / Geneblocks
  Find common blocks and differences between DNA sequences
  ☆42Updated 3 weeks ago
• Gabaldonlab / EvolClust
  Evolcust retrieves groups of genes that appear clustered together in groups of species
  ☆16Updated 3 years ago
• ncsa / NEAT
  NEAT (NExt-generation Analysis Toolkit) simulates next-gen sequencing reads and can learn simulation parameters from real data.
  ☆65Updated last week
• tao-bioinfo / PrimerServer2
  PrimerServer2: a high-throughput primer design and specificity-checking platform
  ☆80Updated 2 years ago
• bioforensics / pytaxonkit
  Python bindings for the TaxonKit library
  ☆41Updated 5 months ago
• salzberg-lab / Balrog
  Bacterial Annotation by Learned Representation of Genes
  ☆58Updated 4 years ago
• mckennalab / Circuitseq
  Nanopore Plasmid Sequencing
  ☆34Updated 2 years ago
• s4hts / HTStream
  A high throughput sequence read toolset using a streaming approach facilitated by Linux pipes
  ☆51Updated 10 months ago
• broadinstitute / adapt
  A package for designing activity-informed nucleic acid diagnostics for viruses.
  ☆34Updated 2 years ago
• Illumina / PromoterAI
  ☆81Updated last week
• quwubin / MFEprimer-2.0
  MFEprimer-2.0: A fast thermodynamics-based program for checking PCR primer specificity
  ☆41Updated 4 years ago
• latch-verified / pathway
  Associate pathways + gene ontologies with significant genes.
  ☆10Updated 2 years ago
• PedroMTQ / mantis
  A package to annotate protein sequences
  ☆60Updated 9 months ago
• liguowang / cpgtools
  Python package to analyze DNA methylation data
  ☆44Updated last month
• JJAlmagro / TargetP-2.0
  Detecting Sequence Signals in Targeting Peptides Using Deep Learning
  ☆13Updated 6 years ago
• DrMicrobit / mira
  MIRA sequence assembler
  ☆30Updated 10 months ago
• gatech-genemark / ProtHint
  Protein hint generation pipeline for gene finding in eukaryotic genomes
  ☆60Updated 2 years ago
• mmcco / RepeatScout
  The RepeatScout 1.0.5, written by Pevzner et al., source code for browsing. The official release and more information are available at h…
  ☆16Updated 2 years ago
• hsinnan75 / GSAlign
  GSAlign: an ultra-fast sequence alignment algorithm for intra-species genome comparison
  ☆60Updated last year