GPrimer: a fast GPU-based pipeline for primerdesign for qPCR experiments
☆11May 28, 2025Updated last year
Alternatives and similar repositories for GPrimer
Users that are interested in GPrimer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The SpeciesPrimer pipeline is intended to help researchers finding specific primer pairs for the detection and quantification of bacteria…☆50Apr 24, 2024Updated 2 years ago
- Optimise PCR primer-set grouping for genetics research☆21Updated this week
- A k-mer frequency statistics software☆15Nov 19, 2021Updated 4 years ago
- A python package for qPCR primers design, check, annotate and visualize.☆11Jan 6, 2025Updated last year
- Searching DNA/RNA sequence databases with PCR and/or probe queries☆27Feb 23, 2026Updated 8 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- MetaProFi is a bloom filter based tool for storing and querying sequence data for accurate identification of functionally relevant geneti…☆13Apr 14, 2022Updated 4 years ago
- genome sequence alignment☆15Oct 9, 2019Updated 7 years ago
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆34Feb 14, 2023Updated 3 years ago
- ASynchronous programming library for Heterogeneous environments☆13Jun 4, 2023Updated 3 years ago
- Overlapped primer design for entire coding sequence of the gene with specificity check☆13Feb 22, 2022Updated 4 years ago
- ☆20May 31, 2026Updated 5 months ago
- BACNET is a Java based platform to develop website for multi-omics analysis☆12Feb 16, 2026Updated 8 months ago
- A Python toolkit that streamlines species-specific primer design.☆13Jun 12, 2025Updated last year
- ☆16Mar 11, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- MethyScan: A tool for methylation specific PCR primer design and evaluation☆16Aug 20, 2021Updated 5 years ago
- KAIST Infolab educational project where students build real data systems—covering SQL, RAG with LLMs, and database internals—using GitHub…☆18Apr 20, 2026Updated 6 months ago
- ☆33Apr 25, 2022Updated 4 years ago
- finding conserved regions in highly diverse genomes☆16May 25, 2026Updated 5 months ago
- General purpose tools for every-day sequencing bioinformatics. If you use any of these tools, please acknowledge this repository (there a…☆12Oct 13, 2020Updated 6 years ago
- Olivar: towards automated variant aware primer design for multiplex tiled amplicon sequencing of pathogens☆42Updated this week
- RAPTR-SV uses Read Pair and Split Read methods to identify structural variants in paired-end WGS data☆10Aug 18, 2016Updated 10 years ago
- Reference-agnostic Representation and Visualization of Pan-genomes☆19Sep 16, 2021Updated 5 years ago
- ☆14Mar 11, 2019Updated 7 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- software to identify primers that can distinguish genomes☆20Aug 31, 2026Updated 2 months ago
- Nunux Keeper CLI☆11Oct 3, 2017Updated 9 years ago
- NGS-PrimerPlex is a high-throughput tool for mupltiplex primer design☆73May 26, 2025Updated last year
- Various version (CPU, CUDA_NAIVE, CUDA_TILED, GEMM) convolutional neural network implementations by Heechul Lim☆31Feb 21, 2018Updated 8 years ago
- This repository contains the code used to analyze data for the Pan-disease Human Blood Atlas, a large-scale plasma proteomics resource co…☆18Aug 6, 2025Updated last year
- Design capture probes☆10Apr 28, 2025Updated last year
- 🧬 Unique (& conserved) DNA sequence identification☆20Jun 4, 2026Updated 5 months ago
- Arch Linux Conference Website (read-only mirror)☆11Jan 2, 2021Updated 5 years ago
- SplitsTree4 phylogenetic network tool☆12Sep 21, 2023Updated 3 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- emapper-utils: utils for parse emapper result☆10Sep 22, 2020Updated 6 years ago
- Code for holographic machine learning of proteins☆25Oct 29, 2024Updated 2 years ago
- Hapmap-v1☆12Feb 3, 2020Updated 6 years ago
- An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot☆28Jul 26, 2022Updated 4 years ago
- Counter-Strike 1.6 Hack Source☆14Aug 27, 2019Updated 7 years ago
- Detailed bioinformatics scripts and methods used in the Maize-Pan-genome paper.☆17Oct 8, 2025Updated last year
- window☆12Feb 24, 2017Updated 9 years ago