Code samples and snippets for the R programming course available at pirple.com
☆18Apr 10, 2020Updated 5 years ago
Alternatives and similar repositories for The-R-Toolkit
Users that are interested in The-R-Toolkit are comparing it to the libraries listed below
Sorting:
- ☆16Aug 17, 2023Updated 2 years ago
- Flutrack platform gathers flu related tweets from the entire world, with searching tag, words that are influenza synonyms and flu symptom…☆13Apr 22, 2019Updated 6 years ago
- A Nextflow pipeline for viral genomics (Influenza/RSV) supporting Illumina and Nanopore sequencing of clinical and wastewater samples.☆10Feb 27, 2026Updated 3 weeks ago
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated 10 months ago
- Datamonkey - Run state-of-the-art statistical models through the comfort of your browser☆10Mar 11, 2026Updated last week
- Tools for Adaptive Immune Receptor Sequence-Based Machine and Deep Learning☆12Feb 6, 2026Updated last month
- An R package with toolkits for tong's friends☆11Mar 18, 2025Updated last year
- Parse scientific names using gnparser (https://github.com/gnames/gnparser)☆15Jan 1, 2026Updated 2 months ago
- Design data and process for the AdaptyvBio protein design competition☆10Dec 11, 2024Updated last year
- Introduction to Nanopore Sequencing - Prac material and presentations from The Omics Australia Tutorials Sydney (TOAST) workshop 19th - 2…☆10Jan 12, 2019Updated 7 years ago
- 🧬 Viral genome reference alignment☆12Jan 26, 2021Updated 5 years ago
- Inferring spatiotemporal dynamics of H5N1 influenza from sequence data☆10Sep 6, 2013Updated 12 years ago
- Import script needed to build FluPRINT database from source☆11May 23, 2019Updated 6 years ago
- An interactive shiny app for processing DIA-nn output (filtering, MaxLFQ, Top3, iBAQ, etc.)☆14Mar 3, 2026Updated 2 weeks ago
- Java Image Processing Pipeline (JIPipe) is a graphical batch processing language for the ImageJ ecosystem☆19May 27, 2025Updated 9 months ago
- GPU-enabled docker container with Jupyterlab for artificial intelligence☆10Aug 11, 2023Updated 2 years ago
- Alwaysnote is an Evernote clone using vuejs, tailwind css, and FastAPI☆14Jan 4, 2023Updated 3 years ago
- phylogenetic networks using ggplot2 and ggtree☆11Oct 22, 2025Updated 4 months ago
- ☆11Aug 26, 2024Updated last year
- computational training at Fred Hutch☆12Jun 11, 2021Updated 4 years ago
- Lecture on viral phylodynamics☆11Oct 28, 2021Updated 4 years ago
- Software to process, statistically analyse and visualise deep mutational scanning data☆14Oct 29, 2025Updated 4 months ago
- Identification of viral RdRPs in single-cell RNA sequencing data☆13Mar 12, 2026Updated last week
- Postprocessing gadgets for output generated by RevBayes☆14Mar 10, 2026Updated last week
- ☆13Dec 4, 2025Updated 3 months ago
- xxmoon摘月——信息收藏、Kindle/微信读书/豆瓣阅读笔记管理☆13Jul 30, 2025Updated 7 months ago
- Java software to analyse phylogeny-trait correlations in discrete traits, accounting for phylogenetic uncertainty via posterior sampling.☆12Sep 26, 2017Updated 8 years ago
- Posterior Analysis of Coalescent Trees☆14Aug 6, 2015Updated 10 years ago
- Allows you to call up a Zotero picker from within Obsidian in Windows 10☆10Jun 9, 2020Updated 5 years ago
- A script to re-color a FigTree saved Nexus file☆13Jan 29, 2017Updated 9 years ago
- A lightweight kmer-based algorithm for designing diagnostic CRISPR assays using genome data.☆13Aug 19, 2024Updated last year
- A minimal MCP Server based on the Anthropic's "think" tool research☆24Aug 1, 2025Updated 7 months ago
- The Dinucleotide Quantification Python Package☆11Mar 12, 2022Updated 4 years ago
- Inference of putative transmission phylogenetic clusters☆12Oct 13, 2020Updated 5 years ago
- R code for writing Beast2 XML (especially morphology/tip-dating)☆11Jun 26, 2024Updated last year
- SARS-CoV-2: detecting recombinations in viruses using large data sets with high sequence similarity☆13Aug 14, 2023Updated 2 years ago
- ☆10Dec 22, 2025Updated 3 months ago
- Bioinformatic MCP server that wraps the most useful functions of the gget library☆26Oct 27, 2025Updated 4 months ago
- An integrated computational framework for comprehensive transcriptome analyses with Nanopore direct-RNA sequencing data☆15May 17, 2025Updated 10 months ago