ome / omero-iviewer
An OMERO.web app allowing to view images
☆19Updated this week
Alternatives and similar repositories for omero-iviewer:
Users that are interested in omero-iviewer are comparing it to the libraries listed below
- Bio-Formats image file format to raw format converter☆85Updated 2 months ago
- Raw format to OME-TIFF converter☆49Updated 2 months ago
- Browse your OMERO database from within napari.☆35Updated 2 weeks ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆40Updated 3 months ago
- Multiple file format reading directly into napari using pure Python☆35Updated 6 months ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆50Updated 3 months ago
- ☆15Updated 2 weeks ago
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆33Updated last month
- Python module utilizing libCZI for reading Zeiss CZI files.☆36Updated 3 weeks ago
- Lectures for a napari training course☆50Updated last year
- GPU-accelerated image processing in QuPath☆15Updated 3 years ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated this week
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆50Updated 3 months ago
- Piecewise alignment for layers of mosaics☆23Updated last month
- Track and lineage visualization with btrack and Napari☆44Updated 3 months ago
- Easily read and write ome-tiff images in python☆26Updated 8 months ago
- Running compute-intense parts of BigStitcher distributed☆21Updated this week
- Accelerated Pixel and Object Classifiers (APOC)☆54Updated 2 years ago
- ☆22Updated 4 months ago
- native Python dataclasses for the OME data model☆55Updated last week
- StarDist plugin for napari☆37Updated 5 months ago
- Python project containing Ice remoting code for OMERO☆24Updated 3 weeks ago
- ☆68Updated last month
- ☆41Updated last week
- LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.☆18Updated last year
- EASI-FISH analysis pipeline for spatial transcriptomics☆33Updated 2 months ago
- StarDist plugin for ImageJ☆27Updated 2 years ago
- Napari Visualization tool for Trackmate > 6.0 and bTrackmate XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆16Updated last month
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆16Updated 2 weeks ago
- NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF☆23Updated 7 months ago