ntamas / netctrlLinks
Controllability models of complex networks
☆28Updated last year
Alternatives and similar repositories for netctrl
Users that are interested in netctrl are comparing it to the libraries listed below
Sorting:
- generalized principal component analysis (GLM-PCA) implemented in python☆59Updated 4 years ago
- A Library for Denoising Single-Cell Data with Random Matrix Theory☆37Updated 2 years ago
- Tools for building and manipulating graphs in Python☆42Updated 2 weeks ago
- Fast Laplacian Eigenmaps: lightweight multicore LE for non-linear dimensional reduction with minimal memory usage. Outperforms sklearn's …☆23Updated 3 years ago
- This Python package will allow you to replicate the experiments from our research on applying Optimal Transport as a similarity metric in…☆42Updated 2 years ago
- Contrastive PCA☆222Updated 11 months ago
- PyTorch implementation of BasisVAE: Translation-invariant feature-level clustering with Variational Autoencoders☆42Updated 5 years ago
- Bootstrap Elastic net regression from Time Series is a vector-autoregressive approach to causal inference from gene expression time serie…☆20Updated 2 years ago
- ☆82Updated last year
- Graph regularized nonnegative matrix factorization (GNMF) in Python☆45Updated 5 years ago
- The need to understand cell developmental processes has spawned a plethora of computational methods for discovering hierarchies from scRN…☆150Updated 4 years ago
- Probabilistic contrastive principal component analysis (PCPCA)☆24Updated 3 years ago
- Attraction-Repulsion Spectrum in Neighbor Embeddings☆31Updated 2 years ago
- Matlab implementation of the Elastic Principal Graphs (ElPiGraph) method☆14Updated 2 years ago
- A Python package for General Graphical Lasso computation☆37Updated 6 months ago
- Git Repo for simulating Boolean Models☆35Updated last year
- Here we address the global structure preservation by tSNE and UMAP☆47Updated 5 years ago
- Branching Gaussian process☆30Updated 2 years ago
- Gumbel Graph Network (GGN) : A General Deep Learning Framework for Network Reconstruction☆70Updated 5 years ago
- pyGPCCA - python GPCCA: Generalized Perron Cluster Cluster Analysis package to coarse-grain reversible and non-reversible Markov state mo…☆22Updated 5 months ago
- Python implementation of network deconvolution as a general method to distinguish direct dependencies in network☆17Updated 11 years ago
- Fast Inference of Networks from Directed Regulations☆22Updated last year
- Creating multi-resolution embeddings and clusters from high dimensional data☆55Updated 11 months ago
- GrandPrix☆16Updated 6 years ago
- Archetypal Analysis network (AAnet)☆37Updated 7 months ago
- Density valley clustering (cluserdv). Matlab implementation.☆27Updated 7 years ago
- Density-preserving data visualization tools den-SNE and densMAP☆114Updated 4 years ago
- ☆48Updated 3 months ago
- Graphical modelling with time series data using an ODE model☆11Updated 3 years ago
- Integrative orthogonal non-negative matrix factorization☆31Updated 5 years ago