Brainchop: In-browser 3D MRI rendering and segmentation
☆543Feb 24, 2026Updated 6 months ago
Alternatives and similar repositories for brainchop
Users that are interested in brainchop are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Portable and lightweight brain segmentation in the terminal!☆21Aug 11, 2026Updated last month
- HistoJS: Web-Based Analytical Tool for Multiplexed Images. Limited Github Online Demo 👇☆22Feb 29, 2024Updated 2 years ago
- a WebGL2 based medical image viewer. Supports over 30 formats of volumes and meshes.☆495Aug 18, 2026Updated last month
- An abundance of augmentation layers☆20Jul 23, 2026Updated 2 months ago
- niimath - a clone of fslmaths. Try the live demo:☆85Sep 14, 2026Updated last week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆25Jun 23, 2026Updated 3 months ago
- Neural network-based MRI preprocessing: Prep 🧠 images in seconds 🔥☆62Nov 28, 2025Updated 9 months ago
- Full head segmentation☆57Jul 15, 2026Updated 2 months ago
- AssemblyNet: 3D Whole Brain MRI segmentation pipeline☆80Jun 28, 2023Updated 3 years ago
- NiiVue extension for vscode + standalone web app☆50Updated this week
- Learning-based Inference of Longitudinal imAge Changes (LILAC)☆19Apr 22, 2026Updated 5 months ago
- Code and model of article "End-to-end learning of brain tissue segmentation from imperfect labeling" https://arxiv.org/abs/1612.00940☆16Mar 22, 2018Updated 8 years ago
- ☆24Aug 30, 2026Updated 3 weeks ago
- A Foundational Keypoint Model for Robust and Flexible Brain MRI Registration☆59Jul 24, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Contrast-agnostic segmentation of MRI scans☆573Jul 17, 2024Updated 2 years ago
- ☆34Dec 11, 2023Updated 2 years ago
- Neuro Lesion Inpainting Tool (neuroLIT / FastSurfer-LIT) for lesion inpainting e.g. for whole brain segmentation and cortical surface rec…☆23Sep 4, 2026Updated 2 weeks ago
- WebGL Library that explores architectural challenges in software design☆16Feb 19, 2016Updated 10 years ago
- A framework for developing neural network models for 3D image processing.☆168Apr 14, 2026Updated 5 months ago
- [Nature Communications] Adaptive Riemannian Optimization for Multi-Scale Diffeomorphic Registration☆141Sep 13, 2026Updated last week
- Trained TensorFlow models for 3D image processing☆29Jan 31, 2024Updated 2 years ago
- standalone Brain Extraction Tool (bet2), released by☆21Dec 23, 2015Updated 10 years ago
- Get images out of DICOM format quickly☆15Mar 27, 2026Updated 5 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- improved susceptibility weighted imaging using multi-echo aquisitions☆29Sep 6, 2026Updated 2 weeks ago
- A real-time diffusion MRI viewer for Linux and Windows using OpenGL 4.6.☆10Apr 23, 2025Updated last year
- A web service for semi-automated conversion of raw imaging data to BIDS☆32May 20, 2026Updated 4 months ago
- DIPY is the paragon 3D/4D+ medical imaging library in Python. Contains generic methods for spatial normalization, signal processing, mach…☆841Updated this week
- v1.2 GLSL volume rendering. Able to view NIfTI, DICOM, MGH, MHD, NRRD, AFNI format images.☆291Nov 23, 2025Updated 10 months ago
- Neuroimaging in PyTorch☆100Sep 15, 2026Updated last week
- Torch utilities for 3D medical imaging☆55Updated this week
- Julia toolbox for Quantitative Susceptibility Mapping☆17Feb 15, 2024Updated 2 years ago
- Published in Nature Communications☆12Feb 19, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- generate connectome from fMRIPrep outputs☆14Jul 27, 2026Updated last month
- Version 2 of the minc-toolkit, uses tools based on ITK version 4.x☆55Updated this week
- Self-Tuning Optimized Kalman Filtering (STOK) + DyNet simulation + connectivity metrics☆13May 10, 2021Updated 5 years ago
- A WebGL-powered Jupyter Widget for Niivue based on anywidget☆52Sep 1, 2026Updated 3 weeks ago
- dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC☆1,191Sep 15, 2026Updated last week
- GUI-based MATLAB software for optimizing the design of fMRI tasks☆16Dec 14, 2023Updated 2 years ago
- MATLAB routines for fMRI/EEG/MEG data processing and visualization with FreeSurfer☆16Updated this week