Alternatives and similar repositories for threeBrain:

Users that are interested in threeBrain are comparing it to the libraries listed below

• bioimagesuiteweb / bisweb
  This is the repository for the BioImage Suite Web Project
  ☆81Updated 2 months ago
• brainsprite / brainsprite
  Brainsprite turns a sprite of brain slices into a 3D interactive web viewer
  ☆42Updated 2 years ago
• BIC-MNI / minc-toolkit-v2
  Version 2 of the minc-toolkit, uses tools based on ITK version 4.x
  ☆53Updated 3 weeks ago
• dfsp-spirit / freesurferformats
  GNU R package for reading and writing neuroimaging file formats. Not limited to FreeSurfer anymore, despite its name.
  ☆23Updated 7 months ago
• baranaydogan / realTimeTractogramVisualizer
  Real-time tractogram computer and visualizer
  ☆15Updated 2 years ago
• sammba-mri / sammba-mri
  small mammals brain MRI
  ☆16Updated last year
• andrewjahn / MRtrix_Analysis_Scripts
  Scripts for analyzing diffusion data with MRtrix
  ☆16Updated 3 years ago
• braincharter / vasculature
  Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space
  ☆49Updated 2 years ago
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆67Updated last year
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆42Updated 5 months ago
• wwu-mmll / deepmriprep
  Neural network-based MRI preprocessing: Prep 🧠 images in seconds 🔥
  ☆32Updated 3 months ago
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆60Updated 3 months ago
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆35Updated 3 weeks ago
• rordenlab / MRIcroWeb
  NIfTI volume rendering using WebGL
  ☆41Updated 2 years ago
• yeatmanlab / AFQ-Browser
  Browser-based visualization tools for AFQ results
  ☆33Updated 7 months ago
• openneuropet / PET2BIDS
  PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sh…
  ☆27Updated last month
• CoBrALab / MAGeTbrain
  Multiple Automatically Generated Templates brain segmentation algorithm
  ☆48Updated 9 months ago
• Deep-MI / BrainPrint-legacy
  Python scripts for shape analysis of neuroimaging data (wrapping around shapeDNA and FreeSurfer)
  ☆20Updated 4 years ago
• braph-software / BRAPH-2
  BRAPH 2.0 is a comprehensive software package for the analysis and visualization of brain connectivity data, offering flexible customizat…
  ☆46Updated this week
• NIST-MNI / nist_mni_pipelines
  NIST-MNI image processing pipelines
  ☆10Updated 3 weeks ago
• Macatools / macapype
  PNH segmentation pipelines based on nipype
  ☆22Updated this week
• SIMEXP / niak
  GNU Octave library for connectivity analysis in large fMRI datasets
  ☆29Updated 2 years ago
• ofgulban / slowest-particle-simulator-on-earth
  A half-serious project to generate **very** serious brain explosions.
  ☆15Updated 2 years ago
• anibalsolon / vscode-neuro-viewer
  Check metadata and visualize neuroimages within VSCode.
  ☆43Updated last year
• bbfrederick / rapidtide
  rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data
  ☆77Updated this week
• volBrain / AssemblyNet
  AssemblyNet: 3D Whole Brain MRI segmentation pipeline
  ☆58Updated last year
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆73Updated 9 months ago
• aces / CIVET_Full_Project
  CIVET Installer
  ☆26Updated 3 years ago
• Mouse-Imaging-Centre / RMINC
  Statistics for MINC volumes: A library to integrate voxel-based statistics for MINC volumes into the R environment. Supports getting and …
  ☆24Updated last month
• neurolabusc / MRIcro
  macOS Xcode GLSL Volume Render for NIfTI, Bio-Rad Pic, NRRD, Philips, ITK MetaImage, AFNI, Freesurfer, DICOM images.
  ☆25Updated 3 years ago