neuronets / trained-models

Related projects ⓘ

Alternatives and complementary repositories for trained-models

• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆64Updated 11 months ago
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆41Updated 2 weeks ago
• Conxz / multiBrain
  A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!
  ☆85Updated 2 years ago
• HALFpipe / HALFpipe
  ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
  ☆74Updated this week
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆63Updated last month
• predictive-clinical-neuroscience / braincharts
  ☆31Updated 5 months ago
• HumanBrainED / NHP-BrainExtraction
  ☆32Updated 2 years ago
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆73Updated 5 months ago
• CoBrALab / RABIES
  fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/e…
  ☆34Updated last month
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆32Updated this week
• SIMEXP / fmriprep-denoise-benchmark
  Benchmark denoising strategies available from fmriprep.
  ☆16Updated 9 months ago
• preprocessed-connectomes-project / quality-assessment-protocol
  Scripts and documentation for the PCP's protocol for assessing data quality.
  ☆40Updated 3 years ago
• niksirbi / brain4views
  Plotting 4 brain surface views on a single matplotlib figure
  ☆12Updated 2 years ago
• nipy / nitransforms
  a standalone fork of nipy/nibabel#656
  ☆28Updated this week
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆72Updated 3 years ago
• andy1764 / CovBat_Harmonization
  Correcting Covariance Batch Effects (CovBat): Harmonization of mean and covariance for multi-site data
  ☆21Updated last year
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆57Updated last week
• neurolabusc / nii_preprocess
  nii_preprocess adapted for LARC and ABC studies at UofSC
  ☆20Updated 2 years ago
• raamana / graynet
  Subject-wise networks from structural MRI, both vertex- and voxel-wise features (thickness, GM density, curvature, gyrification)
  ☆35Updated 6 months ago
• openneuropet / PET2BIDS
  PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sh…
  ☆26Updated last week
• carpentries-incubator / SDC-BIDS-sMRI
  Structural Neuroimaging Analysis in Python
  ☆27Updated this week
• rpomponio / neuroHarmonize
  Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variabl…
  ☆83Updated 5 months ago
• bbfrederick / rapidtide
  rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data
  ☆75Updated this week
• andy1764 / ComBatFamily
  ComBat Family of Harmonization Methods
  ☆16Updated 2 months ago
• TomMaullin / BLMM
  This repository contains all code for the BLMM toolbox.
  ☆19Updated 9 months ago
• ysu001 / PUP
  PET Unified Pipeline
  ☆19Updated 4 years ago
• MICA-MNI / BrainStat
  A statistics and context decoding toolbox for neuroimaging.
  ☆95Updated last month
• alegiac95 / Imaging-transcriptomics
  A package, and script, to perform imaging transcriptomics on a neuroimaging scan.
  ☆19Updated 4 months ago
• cookpa / antsInstallExample
  Simple bash script that downloads and installs ANTs in a unix environment
  ☆13Updated 7 months ago
• illdopejake / Hippocampus_AP_Axis
  Code used for Hippocampus Anterior/Posterior gene expression and neuroimaging analyses
  ☆10Updated last year