msGenDev / bioinformatics_algorithmsLinks
Python code covering some of the algorithms underlying the following fundamental topics in bioinformatics: assembling genomes, comparing DNA and protein sequences, finding regulatory motifs, analyzing genome rearrangements, identifying proteins, and many other topics.
☆12Updated 11 years ago
Alternatives and similar repositories for bioinformatics_algorithms
Users that are interested in bioinformatics_algorithms are comparing it to the libraries listed below
Sorting:
- Solutions to Programming Assignments for Bioinformatics Algorithms (Part 1) on Coursera.org☆30Updated 11 years ago
- My solution to Bioinformatics Specialization (Finding Hidden Messages in DNA; Genome Sequencing; Comparing Genes, Proteins, and Genomes; …☆97Updated 6 years ago
- Repository for code of the book "Bioinformatics Algorithms" by Miguel Rocha and Pedro Ferreira. Editor: Elsevier☆66Updated 6 years ago
- Utilities for downloading and managing protein FASTA files.☆14Updated last year
- Bioinformatics Algorithms on Rosalind☆27Updated 5 years ago
- Daily analyses of genomic SARS-CoV-2 data☆14Updated 2 years ago
- Explore biomolecular pathways in Reactome from the command-line or a Python script☆24Updated 10 months ago
- Highly adaptable common interface for proteomics search and de novo engines☆45Updated 2 weeks ago
- A python implementation of the Statistical Coupling Analysis (SCA)☆25Updated 6 years ago
- CoV-Seq: COVID-19 Genomic Sequence Database and Visualization☆15Updated 4 years ago
- Python for Bioinformatics consist of a variety of python programmes,frequently used by bioinformaticians while handling biological data e…☆43Updated last year
- ☆28Updated 3 years ago
- A collection of tools for Multiple Alignments of DNA, RNA, Protein Sequence☆106Updated 6 months ago
- Galaxy Tool Shed repositories maintained and developed by the GalaxyP community☆35Updated last month
- A Python wrapper around Clustal Omega (http://www.clustal.org/omega/)☆25Updated 3 years ago
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆68Updated 3 years ago
- An Introduction to Applied Bioinformatics, 2nd Edition☆140Updated 2 years ago
- Jupyter notebooks to more effectively leverage computational resources at NCBI.☆29Updated 8 years ago
- Python Programming for Biologists☆137Updated 4 months ago
- Interpretation of proteomics identification results☆50Updated 2 weeks ago
- A collection of random and not so random online learning materials for biology, computation, and bioinformatics☆24Updated 8 years ago
- Workflow4Metabolomics meta repository☆11Updated 3 months ago
- Galaxy Tool wrappers☆124Updated this week
- Tutorials to get started in bioinformatics☆38Updated 3 years ago
- Code repository for the book "Python for the Life Sciences" by Lancaster & Webster☆28Updated 5 years ago
- A software tool for personalized and allele-specific CRISPR editing.☆18Updated 3 years ago
- Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs data☆31Updated last month
- Genomic data science specialization☆79Updated 9 years ago
- Simple image quantification software. Currently implemented for SDS-PAGE gels, western blots, and yeast spotting assays.☆17Updated 3 years ago
- Python Implementation of Codon Adaption Index☆37Updated 2 years ago