mktranstrum / MBAMLinks
Code for the Manifold Boundary Approximation Method
☆15Updated 2 years ago
Alternatives and similar repositories for MBAM
Users that are interested in MBAM are comparing it to the libraries listed below
Sorting:
- PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology☆60Updated last week
- Models that demonstrate the syntax and functionality of BioNetGen language and simulation tools.☆15Updated 2 years ago
- A modern genomics framework for julia☆71Updated 5 years ago
- StochPy is a versatile stochastic modeling package which is designed for stochastic simulation of molecular control networks☆41Updated last month
- Entropy, mutual information and higher order measures from information theory, with various estimators and discretisation methods.☆67Updated 2 years ago
- Fast and flexible code for solving the inverse Ising/Potts inference problem☆27Updated 2 years ago
- Documentation, models and code relating to the 3rd edition of the textbook Stochastic Modelling for Systems Biology☆32Updated 6 months ago
- Modeling toolkit for biochemical simulation☆75Updated 6 months ago
- Generic API for dispatch to Pyro backends.☆16Updated 3 years ago
- Online Principal Component Analysis☆23Updated last month
- Muon for Julia☆28Updated 2 months ago
- Stochastic Gillespie-type simulations using Julia☆63Updated last year
- Causal and probabilistic reasoning with continuous time dynamical systems☆19Updated last month
- Notebook tutorials☆14Updated last year
- A library for bayesian variable selection☆30Updated 6 months ago
- Tutorial Notebooks of BioJulia☆36Updated 4 months ago
- A Julia package to analyze protein sequences, structures, and evolutionary information☆82Updated 3 weeks ago
- Blang's software development kit☆24Updated last year
- High-performance sensitivity analysis for large ordinary differential equation models☆124Updated last week
- Tools for genomic features in Julia.☆34Updated 10 months ago
- Extension of dynamax repo to cases with continuous-time dynamics with measurements sampled at possibly irregular discrete times. Allows …☆13Updated last month
- DEPRECATED Interfaces to common external biological tools from julia scripts and programs☆14Updated 10 months ago
- Simple tests for JAX, PyTorch, and TensorFlow to test if the installed NVIDIA drivers are being properly picked up☆16Updated last month
- Exponential families for JAX☆73Updated last week
- Sequence alignment tools☆64Updated last year
- MATLAB code for simulating the extraction of espresso style coffee☆10Updated 6 years ago
- Data-Driven Constraint-based analysis☆12Updated 2 years ago
- Multiscale simulation of multi-cellular system☆11Updated this week
- MathIOmica is a Mathematica package for omics data analyses☆12Updated 2 years ago
- Spatial computation☆21Updated 3 years ago