BioJulia / BioTools.jlLinks
DEPRECATED Interfaces to common external biological tools from julia scripts and programs
☆14Updated last year
Alternatives and similar repositories for BioTools.jl
Users that are interested in BioTools.jl are comparing it to the libraries listed below
Sorting:
- Julia interface to APIs for various bio-related web services☆22Updated 2 years ago
- Tools for genomic features in Julia.☆35Updated last year
- Tutorial Notebooks of BioJulia☆38Updated last week
- Nucleic and amino acid primitive types☆34Updated 9 months ago
- Core types and interfaces for BioJulia packages☆32Updated 7 years ago
- A modern genomics framework for julia☆71Updated 5 years ago
- Datastructures and algorithms for working with genetic variation☆45Updated 2 years ago
- Parse and process SAM and BAM formatted files☆29Updated 9 months ago
- A Julia package to analyze protein sequences, structures, and evolutionary information☆82Updated last week
- Parse and process FASTA and FASTQ formatted files of biological sequences.☆66Updated last year
- Generic methods, types and modules for the BioJulia ecosystem.☆12Updated last year
- Biological file format specimens for testing packages, and functions to assist in testing.☆15Updated 2 months ago
- FM-index for full-text search☆20Updated 4 years ago
- Sequence alignment tools☆64Updated last year
- Entropy, mutual information and higher order measures from information theory, with various estimators and discretisation methods.☆67Updated 3 years ago
- A lightweight and powerful Julia package for computational pipelines and workflows.☆53Updated last month
- ☆12Updated last year
- Documentation, guidelines, and policy on contributing to all BioJulia repositories☆16Updated 2 years ago
- Plotting and interface tools for biology.☆68Updated last month
- Julia interface to ViennaRNA for RNA structure prediction and analysis☆23Updated last year
- Biological Sequence Substitution Models for Julia☆17Updated 2 years ago
- Phylogenetic trees in Julia☆21Updated 4 years ago
- ☆18Updated 2 months ago
- Datastores for reads, not your papa's FASTQ files.☆11Updated 2 years ago
- A stochastic simulation framework in Julia.☆47Updated 9 months ago
- Plotting utilities for mass spectrometry data☆10Updated 4 years ago
- For analysis of microbiome and microbial community data☆47Updated 2 years ago
- Simple phylogenetic trees in Julia to work with Diversity.jl - https://github.com/EcoJulia/Diversity.jl☆37Updated last month
- Muon for Julia☆28Updated this week
- ☆13Updated last year