Alternatives and similar repositories for cryojax

Users that are interested in cryojax are comparing it to the libraries listed below

• flatironinstitute / cryoSBI
  ☆13Updated this week
• ComputationalCryoEM / ASPIRE-Python
  Algorithms for Single Particle Reconstruction
  ☆58Updated this week
• flatironinstitute / Ensemble-reweighting-using-Cryo-EM-particles
  ☆12Updated last year
• timothygrant80 / cisTEM
  ☆40Updated last week
• bio-phys / BioEM
  GPU accelerating computing for Bayesian inference of electron microscopy images. BioEM is a publicly available software that enables the …
  ☆11Updated 2 years ago
• geoffwoollard / learn_cryoem_math
  ☆126Updated 5 months ago
• evanseitz / ManifoldEM_Python
  ManifoldEM Python suite
  ☆17Updated 11 months ago
• rosalindfranklininstitute / parakeet
  Phantom generator
  ☆23Updated 3 months ago
• ma-gilles / recovar
  ☆35Updated last month
• turonova / cryoCAT
  Contextual Analysis Tools for cryoET and subtomogram averaging
  ☆33Updated 2 weeks ago
• SMLC-NYSBC / ptolemy
  Public release of Ptolemy package for automated targeting of Cryo-EM grids
  ☆18Updated 8 months ago
• SBC-Utrecht / pytom-match-pick
  GPU-accelerated template matching for cryo-ET
  ☆48Updated last month
• bforsbe / OccuPy
  ☆19Updated last year
• 3dem / DynaMight
  Tool for reconstruction and analysis of continuous heterogeneity of a cryo-EM dataset
  ☆31Updated 2 months ago
• proteneer / timemachine
  Differentiate all the things!
  ☆159Updated last month
• ml-struct-bio / drgnai
  ☆52Updated 2 months ago
• flatironinstitute / ManifoldEM
  Python package for determination of conformational continua of macromolecules from single-particle cryo-EM data
  ☆15Updated 2 weeks ago
• tomotools / tomotools
  Scripts to make cryo-electron tomography a bit easier
  ☆14Updated 3 months ago
• charbj / wiggle
  Graphical user interface to integrate cryoEM flexibility analyses with ChimeraX
  ☆24Updated last year
• czimaginginstitute / AreTomo3
  Live processing and real time reconstruction of cryo
  ☆40Updated 4 months ago
• tiwarylab / DynamicsAE
  A deep learning-based framework to uniquely identify an uncorrelated, isometric and meaningful latent representation.
  ☆17Updated 2 years ago
• nysbc / Anisotropy
  These are programs that deal with anisotropy (both resolution and sampling)
  ☆21Updated 7 years ago
• smsharma / eqnn-jax
  Annotated implementations of equivariant (graph) neural networks in Jax: EGNN, SEGNN, NequIP.
  ☆39Updated 8 months ago
• teamtomo / starfile
  STAR file I/O in Python
  ☆51Updated 2 months ago
• phonchi / Computational-CryoET
  A curated list of awesome computational cryo-ET methods.
  ☆64Updated last year
• google-research / e3x
  E3x is a JAX library for constructing efficient E(3)-equivariant deep learning architectures built on top of Flax.
  ☆109Updated 7 months ago
• chanzuckerberg / cryoet-data-portal
  CryoET Data Portal
  ☆25Updated 2 weeks ago
• KosinskiLab / pyTME
  ☆25Updated last month
• e3nn / e3nn-jax
  jax library for E3 Equivariant Neural Networks
  ☆218Updated 2 months ago
• phonchi / Computational-CryoEM
  A curated list of awesome computational cryo-EM methods.
  ☆134Updated 8 months ago