Algorithms for Single Particle Reconstruction
☆62May 14, 2026Updated this week
Alternatives and similar repositories for ASPIRE-Python
Users that are interested in ASPIRE-Python are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆38Updated this week
- Rapidly simulate realistic cryo-EM particles☆18May 18, 2023Updated 3 years ago
- Fast Covariance Estimation, CTF Correction, Denoising of Cryo-EM Images☆13Jul 31, 2025Updated 9 months ago
- Tool for reconstruction and analysis of continuous heterogeneity of a cryo-EM dataset☆33Sep 18, 2025Updated 8 months ago
- A deep manifold learning framework for 4D cryo-EM data processing for simultaneous determination of high-resolution structures and dynami…☆19Sep 12, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆60Apr 7, 2026Updated last month
- Sparse Fourier Backpropagation in Cryo-EM Reconstruction☆12Dec 3, 2023Updated 2 years ago
- A curated list of awesome computational cryo-EM methods.☆148Nov 23, 2025Updated 5 months ago
- ☆131Jun 18, 2025Updated 11 months ago
- Localized reconstruction of flexible subunits from cryo-EM images☆16Oct 19, 2020Updated 5 years ago
- GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series☆25Mar 5, 2026Updated 2 months ago
- ☆44Oct 30, 2023Updated 2 years ago
- A cryo-electron microscopy image simulation library for building data analysis in JAX☆45May 7, 2026Updated last week
- Makes RELION 3.1 Optics Groups from EPU AFIS data☆18May 8, 2023Updated 3 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- GPU accelerating computing for Bayesian inference of electron microscopy images. BioEM is a publicly available software that enables the …☆11Apr 7, 2023Updated 3 years ago
- Neural networks for cryo-EM reconstruction☆376Updated this week
- An algorithm for computing the Fourier shell correlation from a single measurement☆15Nov 11, 2023Updated 2 years ago
- STAR file I/O in Python☆56Nov 24, 2025Updated 5 months ago
- ☆15May 11, 2026Updated last week
- Pytorch Implementation of CryoSPIN, NeurIPS 2024☆18Jan 30, 2025Updated last year
- Leveraging Structural Priors and Constraints for Cryo-EM Heterogeneous Reconstruction☆67Nov 4, 2024Updated last year
- A Docker-based distribution of Appion-Protomo.☆11Oct 23, 2020Updated 5 years ago
- A program interfacing Segment Anything with cryoSPARC via cryosparc-tools to efficiently identify vesicle-embedded membrane proteins and …☆12Feb 18, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography☆59Oct 3, 2025Updated 7 months ago
- Amortized inference for ab initio heterogeneous cryo-EM reconstruction☆41Apr 11, 2023Updated 3 years ago
- Learning to recover orientations from projections in single-particle cryo-EM☆15Jan 30, 2022Updated 4 years ago
- ☆18Updated this week
- ManifoldEM Python suite☆17Nov 22, 2024Updated last year
- A Python implementation of the MRC2014 file format☆87Mar 2, 2026Updated 2 months ago
- Diverse and challenging datasets for the heterogeneity problem in cryo-EM☆41Jan 14, 2026Updated 4 months ago
- Miscellaneous scripts for processing cryo-ET data☆22Feb 25, 2025Updated last year
- Documentations for RELION☆15Mar 13, 2026Updated 2 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- A CTF Simulation Web App☆13May 11, 2026Updated last week
- ☆55Aug 19, 2024Updated last year
- Python programs for electron microscopy☆138Jan 15, 2026Updated 4 months ago
- SIMPLE 4.0: Computational Environment for Electron Microscopy Methods Development☆26Updated this week
- Image-processing software for cryo-electron microscopy☆532Apr 1, 2026Updated last month
- Deep learning tools for converting cryo-EM density maps to protein structures☆19Jan 29, 2025Updated last year
- deep structural disentanglement☆41May 10, 2026Updated last week