megantaylor / Learn-Python-the-Hard-WayLinks
my code from working through Zed Shaw's book
☆14Updated 9 years ago
Alternatives and similar repositories for Learn-Python-the-Hard-Way
Users that are interested in Learn-Python-the-Hard-Way are comparing it to the libraries listed below
Sorting:
- ☆17Updated 3 years ago
- AnceTran2.0: R package for transcriptome evolution analysis based on RNA-seq expression data or ChIP-seq TF-binding data☆11Updated 6 years ago
- processing 10x genomics reads☆27Updated 6 years ago
- QTL mapping with binmap data☆18Updated 6 years ago
- Genotype dimension reduction research. Code for manuscript "UMAP reveals cryptic population structure and phenotype heterogeneity in larg…☆18Updated 2 years ago
- ChIP-seq peak caller for reads mapped to a graph-based reference genome☆25Updated last year
- scripts used to analyse horizontal transfer and evolution of transposable elements in 307 vertebrate species☆11Updated 4 years ago
- Method to optimally select samples for validation and resequencing☆30Updated 4 years ago
- From the comparison of two extant genomes and corresponding gene families, PhylDiag detects conserved segments, i.e. segments of chromoso…☆15Updated 2 years ago
- Scaffolding genomes using synthetic long read clouds☆20Updated 9 years ago
- Detection of structural variants in cancer mate-pair and paired-end data☆13Updated 6 years ago
- Flexible Integration of Data with Deep LEarning☆51Updated 2 years ago
- ☆16Updated 6 years ago
- Archived version 1.0.2☆16Updated 6 years ago
- ☆42Updated 2 years ago
- HMM-HDP models for MinION signal alignments☆46Updated 8 years ago
- Creates an N-chart for comparing assembly lengths, including script for counting assembly lengths from a fasta file☆13Updated 9 years ago
- A scalable variant calling and benchmarking framework supporting both short and long reads.☆14Updated 4 months ago
- Dot2dot: Accurate Whole-Genome Tandem Repeats Discovery☆11Updated 3 years ago
- FINSURF is a tool designed to analyse lists of sequences variants in the human genome.☆12Updated 3 years ago
- BlockPolish: accurate polishing of long-read assembly via block divide-and-conquer☆17Updated 2 years ago
- Manhattan plot Generator☆24Updated 5 years ago
- Tools to convert to and from vcf format☆14Updated 8 years ago
- R package to detect splicing QTLs (sQTLs)☆15Updated 4 years ago
- mdust from DFCI Gene Indices Software Tools (archived for a historical record only)☆11Updated 11 years ago
- Published methods☆15Updated 9 years ago
- ☆25Updated 3 years ago
- Working space for the GIAB TR benchmarking project☆23Updated last year
- TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain☆21Updated last year
- Tutorial on using popular tools for learning about population history☆53Updated 7 years ago