Alternatives and similar repositories for omniplot

Users that are interested in omniplot are comparing it to the libraries listed below

• higlass / higlass-python
  Python bindings to and Jupyter Notebook+Lab integration for the HiGlass viewer
  ☆59Updated 2 weeks ago
• KenLauLab / dropkick
  Automated cell filtering for single-cell RNA sequencing data
  ☆24Updated last year
• jrderuiter / pybiomart
  A simple pythonic interface to biomart.
  ☆55Updated 5 years ago
• krassowski / gsea-api
  Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)
  ☆15Updated 2 years ago
• bioFAM / mofax
  Work with trained factor models in Python
  ☆33Updated 6 months ago
• saezlab / CARNIVAL
  CAusal Reasoning for Network Identification with integer VALue programming in R
  ☆59Updated last year
• bioFAM / mofapy2
  Multi-omics factor analysis v2
  ☆44Updated 6 months ago
• cellatlas / human
  ☆43Updated 6 months ago
• Dowell-Lab / TFEA
  Transcription Factor Enrichment Analysis
  ☆34Updated last week
• COMBINE-lab / simpleaf
  A rust framework to make using alevin-fry even simpler
  ☆54Updated 2 weeks ago
• glasgowcompbio / pyMultiOmics
  Python toolbox for multi-omics data mapping and analysis
  ☆24Updated 2 years ago
• loosolab / UROPA
  Universal RObust Peak Annotator
  ☆16Updated last year
• aertslab / arboreto
  A scalable python-based framework for gene regulatory network inference using tree-based ensemble regressors.
  ☆59Updated last year
• aertslab / pycistarget
  pycistarget is a python module to perform motif enrichment analysis in sets of regions with different tools and identify high confidence …
  ☆17Updated 3 months ago
• gtrichard / deepStats
  deepStats: a stastitical toolbox for deeptools and genomic signals
  ☆34Updated 3 years ago
• ponnhide / pyCircos-examples
  Example notebooks of pyCircos
  ☆29Updated 2 years ago
• gladstone-institutes / Interactive-Enrichment-Analysis
  A set of Shiny apps to provide interactive enrichment analysis and exploration of results.
  ☆28Updated 3 weeks ago
• dwgoon / nezzle
  Network Visualization using both GUI and Programming
  ☆28Updated 10 months ago
• Teichlab / MultiMAP
  MultiMAP for integration of single cell multi-omics
  ☆56Updated last year
• frankligy / SNAF
  Splicing Neo Antigen Finder (SNAF) is an easy-to-use Python package to identify splicing-derived tumor neoantigens from RNA sequencing da…
  ☆47Updated 3 months ago
• umccr / neoantigens
  🏺 Exploring novel tumor epitope identification
  ☆34Updated 4 years ago
• Marsilea-viz / legendkit
  Legend made easy for matplotlib
  ☆27Updated 3 months ago
• mritchielab / FLAMES
  A framework for performing single-cell and bulk read full-length analysis of mutations and splicing.
  ☆34Updated 3 weeks ago
• hbctraining / Intro-to-peak-analysis
  An introduction to various methods/approaches for the analysis of peaks generated from ChIP-seq / CUT&RUN / ATAC-seq
  ☆23Updated last month
• MaayanLab / blitzgsea
  Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …
  ☆47Updated 3 weeks ago
• hms-dbmi / chromoscope
  Interactive multiscale visualization for structural variation in human genomes
  ☆68Updated this week
• sebriois / biomart
  Python biomart API
  ☆65Updated last year
• mikelkou / fava
  Functional Associations using Variational Autoencoders
  ☆39Updated 3 months ago
• czbiohub-sf / cerebra
  A tool for fast and accurate summarizing of variant calling format (VCF) files
  ☆60Updated 2 years ago
• Xinglab / PEGASAS
  Pathway Enrichment-Guided Activity Study of Alternative Splicing (PEGASAS)
  ☆19Updated 2 years ago