Alternatives and similar repositories for DataSAIL

Users that are interested in DataSAIL are comparing it to the libraries listed below

• patrickbryant1 / Cfold
  Structure prediction of alternative protein conformations
  ☆76Updated 5 months ago
• Boehringer-Ingelheim / pyPept
  pyPept: a python library to generate atomistic 2D and 3D representations of peptides
  ☆73Updated 11 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆51Updated 2 months ago
• molecularmodelinglab / plantain
  Fast and accurate molecular docking with an AI pose scoring function
  ☆41Updated last year
• vsomnath / flexdock
  Composing Unbalanced Flows for Flexible Docking and Relaxation (ICLR 2025)
  ☆47Updated last month
• guyuehuo / opendock
  ☆48Updated 8 months ago
• gitter-lab / metl
  Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models
  ☆38Updated 2 months ago
• molML / peptidy
  The official codebase of peptidy, a peptide processing tool for machine learning.
  ☆32Updated 3 months ago
• rwmontalvao / Melodia_py
  Protein Structure Analysis
  ☆55Updated last month
• Jnelen / DiffDockHPC
  DiffDock implementation that adds support for HPC execution using Slurm and Singularity
  ☆26Updated 2 months ago
• liedllab / surface_analyses
  Scores for Hydrophobicity and Charges based on SASAs
  ☆34Updated 2 months ago
• rcsb / py-rcsbsearchapi
  Python interface for the RCSB PDB search API.
  ☆63Updated 4 months ago
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆30Updated last year
• Protein-Engineering-Framework / PyPEF
  PyPEF – Pythonic Protein Engineering Framework
  ☆24Updated 2 months ago
• haddocking / arctic3d
  Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information
  ☆30Updated 2 weeks ago
• mirabdi / PDAnalysis
  ☆32Updated last year
• meyresearch / BALM
  Learning Binding Affinities via Fine-tuning of Protein and Ligand Language Models
  ☆29Updated 8 months ago
• adaptyvbio / competition_metrics
  Metrics for our protein design competitions.
  ☆35Updated 9 months ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆55Updated 9 months ago
• bwicky / oligomer_hallucination
  ☆36Updated last year
• silicogenesis / protkit
  A Unified Approach to Protein Engineering
  ☆42Updated last year
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆42Updated 2 years ago
• CDDLeiden / PCMol
  Multi-target de novo molecular generator conditioned on AlphaFold's latent protein embeddings.
  ☆66Updated 4 months ago
• AaronFeller / PeptideCLM
  ☆22Updated 4 months ago
• tiwarylab / GrASP
  Graph Attention Site Prediction (GrASP): Identifying Druggable Binding Sites Using Graph Neural Networks with Attention
  ☆53Updated last month
• amyguo1997 / dynamic_protein_design
  Code for deep learning guided design of dynamic proteins
  ☆30Updated last year
• lehner-lab / MoCHI
  Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…
  ☆51Updated 4 months ago
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆70Updated last month
• Exscientia / abodybuilder3
  ☆63Updated 9 months ago
• casperg92 / MaSIF_colab
  dMaSIF implementation for google colab
  ☆32Updated 2 years ago