Alternatives and similar repositories for DataSAIL

Users that are interested in DataSAIL are comparing it to the libraries listed below

• patrickbryant1 / Cfold
  Structure prediction of alternative protein conformations
  ☆76Updated 4 months ago
• vsomnath / flexdock
  Composing Unbalanced Flows for Flexible Docking and Relaxation (ICLR 2025)
  ☆43Updated last month
• KULL-Centre / _2023_Tesei_IDRome
  ☆43Updated 3 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆51Updated 2 months ago
• guyuehuo / opendock
  ☆48Updated 7 months ago
• meyresearch / BALM
  Learning Binding Affinities via Fine-tuning of Protein and Ligand Language Models
  ☆27Updated 7 months ago
• gitter-lab / metl
  Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models
  ☆38Updated last month
• Boehringer-Ingelheim / pyPept
  pyPept: a python library to generate atomistic 2D and 3D representations of peptides
  ☆73Updated 10 months ago
• liedllab / surface_analyses
  Scores for Hydrophobicity and Charges based on SASAs
  ☆32Updated last month
• haddocking / arctic3d
  Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information
  ☆30Updated 2 weeks ago
• iambic-therapeutics / np-bench
  A benchmark for 3D biomolecular structure prediction models
  ☆61Updated 2 months ago
• silicogenesis / protkit
  A Unified Approach to Protein Engineering
  ☆42Updated last year
• casperg92 / MaSIF_colab
  dMaSIF implementation for google colab
  ☆32Updated 2 years ago
• ShenLab / SeqDance
  code for SeqDance/ESMDance, biophysics-informed protein language models
  ☆38Updated 3 months ago
• DeepRank / deeprank2
  An open-source deep learning framework for data mining of protein-protein interfaces or single-residue variants.
  ☆52Updated 7 months ago
• molecularmodelinglab / plantain
  Fast and accurate molecular docking with an AI pose scoring function
  ☆40Updated last year
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆28Updated last year
• adaptyvbio / competition_metrics
  Metrics for our protein design competitions.
  ☆33Updated 8 months ago
• bwicky / oligomer_hallucination
  ☆36Updated last year
• tiwarylab / GrASP
  Graph Attention Site Prediction (GrASP): Identifying Druggable Binding Sites Using Graph Neural Networks with Attention
  ☆51Updated 3 weeks ago
• rwmontalvao / Melodia_py
  Protein Structure Analysis
  ☆55Updated 3 weeks ago
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆37Updated 2 weeks ago
• amyguo1997 / dynamic_protein_design
  Code for deep learning guided design of dynamic proteins
  ☆30Updated last year
• svats73 / mdml
  mdml: Deep Learning for Molecular Simulations
  ☆43Updated 2 months ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆55Updated 8 months ago
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆67Updated 10 months ago
• Protein-Engineering-Framework / PyPEF
  PyPEF – Pythonic Protein Engineering Framework
  ☆24Updated last month
• Graylab / DFMDock
  DFMDock (Denoising Force Matching Dock), a diffusion model that unifies sampling and ranking within a single framework.
  ☆47Updated last month
• CDDLeiden / PCMol
  Multi-target de novo molecular generator conditioned on AlphaFold's latent protein embeddings.
  ☆65Updated 3 months ago
• feiglab / idpgan
  ☆48Updated 6 months ago