jdherman / hpc-submission-scriptsLinks
Example job submission scripts for HPC systems (PBS and SLURM)
☆45Updated 8 years ago
Alternatives and similar repositories for hpc-submission-scripts
Users that are interested in hpc-submission-scripts are comparing it to the libraries listed below
Sorting:
- HPC Python lesson materials☆61Updated 2 years ago
- Connect to a LSF main node directly or trough a ssh jump node, launch a jupyter notebook via bsub and open automatically a tunnel. The n…☆20Updated 3 years ago
- Settings file for matplotlib to maximize figure niceness.☆35Updated 3 years ago
- submit jobs to slurm with quick-and-dirty python☆94Updated 2 years ago
- Materials for a Python in HPC class☆34Updated 5 years ago
- An application for parameterization of biological models available in SBML and BNGL formats. Features include parallelization, metaheuris…☆24Updated last week
- ☆87Updated this week
- A Python class for scheduling SLURM jobs☆58Updated 9 months ago
- An NSF proposal template in LaTeX☆126Updated 3 years ago
- Jupyter widget for the dynamic and static visualizations of systems biology models written in PySB, BNGL, and SBML☆27Updated 2 years ago
- Container tools for scientific computing! Docs at https://singularityhub.github.io/singularityhub-docs☆69Updated 3 years ago
- A command line interface to Globus☆80Updated this week
- A collection of various resources, examples, and executables for the general NREL HPC user community's benefit. Use the following website…☆128Updated last week
- SLURM Example Scripts☆71Updated 5 years ago
- definition files and wrapper scripts used by NIH HPC staff to install user-facing apps on the Biowulf cluster☆30Updated 4 years ago
- Generate NSF Collaborators and Other Affiliations Information from your publications☆27Updated 4 years ago
- Build and deploy Singularity containers to GitHub releases, and pull with the singularity-hpc client☆17Updated last year
- Benchmarking and metadata tracking for Python. Extensible, with distributed/cluster support.☆17Updated 11 months ago
- A python package for producing publication quality images using matplotlib.☆101Updated 4 years ago
- The CWL v1.0 - v1.2 user guide☆43Updated 9 months ago
- Increasingly complete example bioinformatics workflow☆18Updated 2 years ago
- 📝 Easily convert Digital Object Identifier (DOI) and Uniform Resource Locator (URL) to BibTeX and DOI to plain text.☆38Updated 2 years ago
- A simple utility for executing multiple sequential or multi-threaded applications in a single multi-node batch job☆63Updated last year
- A repository of definition files for bootstrapping Singularity containers around the software applications, frameworks, and libraries you…☆63Updated 3 months ago
- Scientific formulae for Homebrew and Linuxbrew (legacy)☆157Updated 5 months ago
- MOCCASIN translates basic ODE-based MATLAB models of biological processes into SBML format.☆12Updated 11 months ago
- python wrapper to submit jobs to bsub (and later qsub)☆44Updated 3 years ago
- MathIOmica is a Mathematica package for omics data analyses☆12Updated 2 years ago
- An Introduction to High Performance Computing☆149Updated 3 months ago
- Misc. utilities☆11Updated 6 years ago