Alternatives and similar repositories for nsf-coa:

Users that are interested in nsf-coa are comparing it to the libraries listed below

• encore-similarity / encore
  An extension to the MDAnalysis library providing support for dealing with structural ensembles. There is currently support for calculatin…
  ☆14Updated 6 years ago
• Emergent-Behaviors-in-Biology / community-simulator
  Simulate microbial community batch culture experiments.
  ☆42Updated 3 months ago
• KULL-Centre / pdbwords
  Printing text using protein structures
  ☆13Updated 3 years ago
• quantumbrake / cayenne
  Python package for stochastic simulations
  ☆17Updated last week
• awlong / DiffusionMap
  C++ implementation of the Diffusion Map, with Python bindings
  ☆10Updated 7 years ago
• ZhangGroup-MITChemistry / DRAGON
  ☆12Updated last year
• junioreif / OpenMiChroM
  ☆13Updated last month
• troycomi / snakemake-training
  Increasingly complete example bioinformatics workflow
  ☆17Updated 2 years ago
• biosustain / Maud
  Enzyme models that take into account kinetics, allostery and thermodynamics
  ☆27Updated 5 months ago
• csb-toolbox / CSB
  A Python framework for structural bioinformatics.
  ☆13Updated last year
• channotation / chap
  CHAP is a tool for the functional annotation of ion channel structures:
  ☆21Updated last year
• jbloomlab / SARS2-mut-fitness
  Observed substitution counts of SARS-CoV-2 compared to those expected under the mutation rates
  ☆19Updated 3 months ago
• choderalab / ensembler
  Automated omics-scale protein modeling and simulation setup.
  ☆52Updated 3 years ago
• jchodera / statmech-for-biochemists
  A primer on statistical mechanics for biochemists
  ☆46Updated 2 years ago
• hsidky / dmaps
  C++ Accelerated Python Diffusion Maps Library
  ☆23Updated 6 years ago
• Pappulab / localCIDER
  localCIDER - sequence analysis tool for disordered protein sequences
  ☆23Updated last year
• CollepardoLab / CollepardoLab_Chromatin_Model
  Source code for "Nucleosome plasticity is a critical element of chromatin liquid–liquid phase separation and multivalent nucleosome inter…
  ☆12Updated 2 years ago
• rcc-uchicago / parallel-python
  Parallel programming with Python exercises
  ☆12Updated 3 months ago
• pstjohn / dFBA
  Dynamic Flux Balance analysis in Python
  ☆11Updated 9 years ago
• MobleyLab / Training
  Lab policies, training, style guides, etc.
  ☆35Updated 10 months ago
• whitead / marvis
  VMD Audio/Text control with natural language
  ☆18Updated 3 years ago
• Edinburgh-Chemistry-Teaching / Data-driven-chemistry
  ☆24Updated last year
• StochSS / GillesPy2
  Modeling toolkit for biochemical simulation
  ☆73Updated 3 weeks ago
• srnas / spqr
  Simulation code for the prediction of RNA structures.
  ☆10Updated 3 weeks ago
• phiweger / foldvis
  Protein visualization without the pain
  ☆9Updated 2 years ago
• matthiaskoenig / dfba
  Encoding Dynamic Flux Balance Analysis in SBML
  ☆11Updated 4 years ago
• jdherman / hpc-submission-scripts
  Example job submission scripts for HPC systems (PBS and SLURM)
  ☆45Updated 8 years ago
• gregorpatof / nrgten_package
  Najmanovich Research Group Toolkit for Elastic Networks
  ☆11Updated last year
• ihh / trajectory-likelihood
  Calculate indel trajectory likelihoods using methods of Miklós, Lunter & Holmes (2004), De Maio (2020), and Holmes (2020)
  ☆14Updated 2 years ago
• mglerner / IntroToBiophysics
  Introduction to Biophysics, requires one semester of calculus-based Physics.
  ☆26Updated last year